Polyodon spathula (Mississippi paddlefish): 121321017
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Entry
121321017 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121321017
04082 Neuroactive ligand signaling
121321017
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121321017
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121321017
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
PCC_BT
Motif
Other DBs
NCBI-GeneID:
121321017
NCBI-ProteinID:
XP_041115847
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All DBs
Position
9:50911019..50965606
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AA seq
475 aa
AA seq
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MWGFQRRRLFGILSAPVLVAVVCCAQSANEPGNMSFVKETVDNLLNGYDIRLRPDFGGPP
VAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYSGIPLNLTLDNRVADQLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIGFYWRGGDSAVTGVGRIELPQFSIVEYRLVSRNVVFATGAYPRLSLSFKLK
RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKI
PYVKAIDLYLMGCFVFVFLALLEYAFVNYIFFGRGPQLQKKLAEKIEKANNDRSKYEGNK
MDTHGNILLTSLEIHNEVAGNEITTSVSESRNSSMALDNSGIQYRKQSMPRDATAPHSKD
KNAQLKKSRLRRRSSQLKIKIPDLTDVNTIDRWSRIVFPAAFTLFNVIYWLYYVN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtgggggtttcagagaaggcgactgtttggtattctttcggcaccagtcttagtagca
gtggtgtgctgtgcacagagcgccaatgagccggggaacatgtcgtttgtaaaagagact
gtggataacctgttaaacggatatgacatacgcctcagaccagattttggaggtcccccg
gttgctgttgggatgagcatagacgtagccagtatagacatggtatcagaagtaaacatg
gactataccttgaccatgtactttcaacagtactggagggacaagaggctggcttactcg
ggaatacctctcaatttaacacttgataaccgggtggctgatcagctgtgggtccccgac
acctactttctgaatgacaagaagtcctttgtgcacggcgtcactgtgaagaaccggatg
attcggcttcatccagatggaacagtgctgtacggcctgagaatcacaacaacagctgcc
tgcatgatggatctgcggagatacccattggatgaacagaactgcacactggaaatagaa
agctatggctacacaacagatgatatcgggttctactggagaggaggagactctgctgtg
actggggtgggaaggatcgagctgcctcagttctccattgtggaatacaggctggtctct
cgcaatgtcgtctttgccacaggtgcctacccacgactgtctctgagcttcaagctgaag
agaaacattggatacttcatccttcagacctacatgccctcaattctgattaccattctg
tcttgggtgtcattttggatcaattacgatgcatccgctgcaagagttgctttaggaatt
acaactgtactcacaatgacaacaatcaacactcacctcagagagactttgcccaaaatc
ccctacgttaaagccatagacttgtatctgatgggctgcttcgtcttcgtcttcttggca
ttactggagtatgctttcgtcaactacatcttttttggaagaggcccacagttacagaag
aaacttgcagagaagatagaaaaggccaacaatgaccggtccaaatatgaaggcaacaag
atggacactcatggcaacatcttgctaaccagtttggagattcacaatgaagtggcagga
aatgagatcaccaccagtgttagcgagtccaggaattcctcaatggccttggacaactca
ggaatccagtacaggaaacagagcatgcctcgggatgcaacggcccctcacagcaaggac
aagaatgcccagttgaagaagagtcgtctgaggagaaggtcatcacagctgaaaatcaaa
atcccagatctgactgatgtgaacaccattgacaggtggtcaagaatagtgttcccagct
gcgtttacactcttcaacgtaatctattggctttactatgtcaactaa
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