Polyodon spathula (Mississippi paddlefish): 121321018
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Entry
121321018 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121321018
04082 Neuroactive ligand signaling
121321018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121321018
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121321018
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
121321018
NCBI-ProteinID:
XP_041115849
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Position
9:complement(50873799..50904668)
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AA seq
462 aa
AA seq
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MDNGILCFATMKTPLAFLVLASIICCLSVSQMAAGTLKEDSNNNITIFTRILDGLLDGYD
NRLRPGLGERITEVKTNIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLKFKGPMQRLPLN
NLLASKIWTPDTFFLNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDFP
MDAHACPLKFGSYAYPDSEVVYIWTSGAARSVVVAEDGSRLNQYHLIGQTVGREVIRTST
GQYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT
TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKALEAHQ
TKKKPPMALTKKANNACMAVGVNNTANIMKESVLSTISNSTSVQMKPTEAKPPEAEKTYN
SISRIDNMSRIVFPVLFGTFNLVYWATYLNREPVIRGALTPK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggacaatggaatactctgctttgctacaatgaaaacccccttggccttcttagttctt
gccagcataatctgctgccttagtgtatcacagatggcagcgggaacactgaaggaagac
tccaataacaatattaccatattcacaaggattttagatggattgctggatgggtatgat
aacaggctgcgtcctggattgggagaaagaataacagaggtaaaaacaaatatctacgtc
acaagctttggcccagtctcagatactgaaatggaatatacgattgatgtgtttttccgc
caaagctggaaggacgaacgacttaaatttaaaggaccgatgcaaagacttcccttgaac
aaccttctagccagcaaaatctggacaccagacaccttctttctcaatggcaagaaatcc
attgctcacaacatgaccactcccaacaagctgctgcgcttggaggatgatgggactctg
ctctacaccatgagattgaccatttctgctgaatgtcctatgcaactggaagactttccc
atggatgctcatgcatgccctcttaaatttggaagctatgcctatccagactctgaagtt
gtttatatctggacctctggtgccgcccgttctgttgttgtggctgaagacggttcgagg
ttgaaccagtatcatctaataggacagacagtggggagggaggtcatcagaacaagcaca
ggacaatatactgtaatgacggcacattttcacctgaagagaaaaatcgggtactttgta
atccagacctacctcccgtgcattatgacggttatcctgtctcaggtgtcgttctggtta
aacagagagtcagtgcctgcaaggactgtgtttggtgtcaccacagtgctgacaatgaca
acgttaagcatcagtgctcgcaactctttgcccaaagtggcgtatgctacagcaatggac
tggtttatagcagtgtgctatgcatttgtcttctccgcactaatagaatttgccactgta
aattatttcaccaaacgaagctgggcatgggacggcaaaaaagcgctcgaagcccatcaa
accaagaaaaagcctcccatggcactaacaaagaaagcgaacaacgcctgcatggctgtg
ggagtgaacaacacagcgaacatcatgaaggaatcggtcctttccaccatttccaacagc
acctcagtgcagatgaaacccacagaagcaaagcctccggaggctgaaaagacttacaac
agcatcagcaggatcgataacatgtccaggatcgtgttcccagtgctttttgggactttc
aacctagtctactgggccacgtatctgaacagagagccagtaataaggggagccttaact
cccaaatga
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