KEGG   Polyodon spathula (Mississippi paddlefish): 121321022
Entry
121321022         CDS       T07273                                 
Symbol
ercc5
Name
(RefSeq) DNA repair protein complementing XP-G cells homolog isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    121321022 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121321022 (ercc5)
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121321022 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc CreA
Other DBs
NCBI-GeneID: 121321022
NCBI-ProteinID: XP_041115858
LinkDB
Position
9:51405104..51441619
AA seq 1159 aa
MGVQGLWKLLECTGRPINPETLEGKVLAVDISIWLNQALKGARDRDGNSVHNAHLLTLFN
RLCKLLFFRIRPVFVFDGDAPLLKKQTLASRRQRKVEAVKESKETSEKLLKTFLKRQAIK
AALGDRSQETLPSISNVRREEVDDMYVLPSLQDKELNSSEEEAEQEWEETATNRRIFQEE
FFENPNAMDIDSEEFATLPAEVKHEILNEMKEFSKRRRTMFEAPPEKSLEFSQYQLSGLL
KRNNLNQRIQSVQAELNQQSSGLLPVEFSMEGGADSSMETRRLLSEDTSHYILITGKKKT
KKALEEKETIQPSASKSKGAIVCVEPPLWHPAPNEEPPSPGTLWAIREAVQEEESAHTGA
APPSPRTVQAIQAAMESSSEDVEDVDSEMAWRQEAVLGRGELWRQEAVLGRGELWRQEAV
LGSGGLLTQEAALGSGGLLRQEAVLGSGDTSEGRLLTQGAVLGSGELLTQGAVLGSGGLS
PRTLCANQVALKYDRKEKPVKQSENNQQGVRKTILISSSDDEDIMDVTCERNQASRATVA
VQSTLLEDKSLEVVHMEDSSSRSEKASGNLEGDYDHSHAAKLELGKRVSDKLLGNENGSE
ITLLPHLAVSNRKGADSPACTLSSEAGETSVYSSKEESSKDTKQNVILEDFSAIGTEMLQ
RGSEESDSEESFIEVSDVEEVDPPEEWFGAPHPTSTTEHILNPAARQECAEEKAVNEWAD
RSLEELEVLENNLYVQQKCLQAEKQQQERIAATVTGQMQLESQELLRLFGIPFIVAPMEA
EAQCAILDLTDQTSGTITDDSDIWLFGARHVYKNFFSQNKYVESYQYSDLQNQLGLDRSK
LINLAYLLGSDYTEGIPGVGYVTGMEILNEFPGPGMDPLIKFCDWWTDAQKNKKMRPNPN
DSKVKRKLRNLQLQPGFPSPAVSEAYLKPVVDDSQDGFFWGRPNLEEIKEFCGCRFGWNG
RKTDELLLPVMKQLNAQQTQLRIDSFFRLEQHERQAMKSQRLRRAVSCMKRKQREEEEDE
TPVLEEGSQALGKGKKAAVATESPRSQSQNKDRKQPEIPLSGGGFLDFSEAVQQGVSLEE
EVSVRETKAMKPGLPTSQTRAAQKWEPLPVTPKEWRNGSSSSEESDGGNEGAMVTAKSVF
ENQKGKTNKSTRARKRRRV
NT seq 3480 nt   +upstreamnt  +downstreamnt
atgggagtgcagggcttgtggaagctgcttgaatgcacaggaagaccaattaatccagag
accctagaggggaaagtccttgctgttgatatcagcatttggttgaaccaggctttgaaa
ggcgcgagagaccgggacgggaactctgttcacaatgctcacctcctgaccctgttcaat
cggctgtgcaagctgctgttttttagaatacgacccgtatttgtgtttgacggcgatgcc
cccctgctcaagaagcagacgctggcaagtagaaggcagaggaaggtagaagcagttaaa
gagtcaaaagaaacatcagagaagctactgaaaacgttcctgaagagacaagccatcaaa
gctgctttgggagaccggagtcaagagactttgcccagcatttcaaatgtccgaagggaa
gaagtggacgatatgtatgttttgccttccttgcaagataaagaactaaacagttctgaa
gaggaagctgagcaagaatgggaagagacagcgactaacaggagaatatttcaggaagaa
ttttttgagaatcccaacgctatggacatcgactctgaagaatttgccactttacctgca
gaagtgaagcatgagatccttaatgagatgaaggagtttagcaagagacgaagaacaatg
tttgaagcgccgccagagaaatccctcgagttttcacagtaccagctgagcggattgctg
aagaggaacaatctaaaccagcgcatccagagtgtgcaggcagagctgaatcagcagagc
tcagggctgctgccagtggagttcagcatggagggaggagctgacagcagcatggagaca
cggaggctgctctcagaggacacttcgcattacatactcattacagggaaaaagaaaact
aaaaaagctttggaggagaaagaaacaattcagccctcggctagcaaatccaaaggagcc
atcgtttgtgtggaacctcctctctggcacccagcgccaaatgaagagcctccctcccct
ggcacactctgggcaatcagagaggcagtgcaggaggaggagagcgcccatactggtgct
gccccgccgtctcccagaactgtgcaggccattcaggcagccatggagagtagctctgaa
gatgtggaagatgttgacagtgaaatggcctggagacaggaggctgtgcttggtagagga
gagctctggagacaggaggctgtgcttggtagaggagagctctggagacaggaggctgtg
cttggctcaggaggactgttgacacaggaggctgcgcttggctcaggaggactcttgaga
caggaggctgtgcttggctcaggtgatacaagtgaaggacggctcttgacacagggggct
gtgcttggctcaggagagctcttgacacagggcgctgtgcttggctcaggaggactgtca
ccaaggactctgtgtgccaaccaggtggctcttaaatacgacaggaaggaaaaaccagtg
aagcaatctgaaaacaaccagcagggtgtcagaaaaacaattctcatcagcagctccgat
gacgaggacatcatggacgtaacctgtgaaagaaaccaagcttcccgagctaccgtagct
gtgcagagcacgctgctggaggacaagtctcttgaagtggttcacatggaggacagcagt
tcaagatctgaaaaagcaagtgggaatctagaaggcgattatgaccattcccacgcagct
aaactggaattgggcaaaagggtgtccgacaagctgcttggaaatgaaaatggttcagaa
atcactttgcttcctcacttagcagtttcaaataggaagggagctgattcaccagcctgc
accctttcttcagaggctggagagacatcagtttattcttctaaagaggaaagttctaaa
gacacaaaacaaaatgtgattttggaagatttctctgcaataggtacagaaatgctgcag
aggggaagtgaagagagtgattcagaagagagctttattgaggtgtctgatgtggaggag
gtggaccccccagaagaatggtttggtgctccacaccccacttctacaaccgagcacatt
ctcaaccctgcagccagacaagagtgtgctgaagagaaggctgtgaacgagtgggcagat
aggagcttggaagaactggaagtgctggagaacaacctttatgtacaacagaagtgcctt
caggctgagaaacagcagcaggaacgtattgctgctactgtcactggccagatgcagctg
gagagccaggagctgctgcgtctctttggcattcctttcattgtagcccccatggaggct
gaagcacagtgtgccatcctggacctcactgaccagactagtgggaccataactgatgac
agtgacatctggctgtttggggcaagacacgtctacaaaaacttcttcagccagaacaaa
tatgtggagtcctaccagtacagtgatcttcaaaaccagctaggtttagaccgaagtaaa
ctcatcaatttggcctatttgctgggtagtgattacacagagggcattcctggggtgggg
tatgtgactggaatggagattttaaatgaattcccaggaccaggaatggatcctctcatt
aagttctgtgactggtggacagacgctcagaagaataagaagatgaggccgaaccccaac
gacagcaaagtgaagcggaagctgcggaacttacagctgcagcccggctttcccagccct
gctgtatcagaggcctacctgaagccagtggtggacgactcccaggacggcttcttctgg
ggtcgacccaatctggaggagataaaagaattctgtggttgtcgctttggctggaatgga
agaaaaacagatgaacttctcttgcctgtaatgaagcagctgaatgcccaacagacccag
ctgcggattgattccttctttagactggagcagcatgagaggcaggccatgaagagccag
cgcctgcgcagagctgtgtcctgcatgaagagaaagcagcgagaggaggaggaggatgag
actcctgtcctggaggaggggagccaggccctggggaaagggaagaaagcagcagtggcc
acagagtcacccagatcccagtcacagaacaaggacagaaagcagccagagatccccttg
agtggaggaggctttctggacttttcggaagcagtccagcagggggtgtctttagaggaa
gaggtctctgtgagggagacaaaggcaatgaaaccgggactgcccacatcccagaccaga
gcagctcagaaatgggagcctctccctgtcacccctaaagaatggaggaacggtagcagc
tccagtgaggagagtgatgggggcaacgagggggcgatggtcactgccaaatccgtgttt
gaaaaccaaaagggcaaaactaacaaaagcacgagagcgagaaagagaagaagagtttga

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