Polyodon spathula (Mississippi paddlefish): 121321041
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Entry
121321041 CDS
T07273
Name
(RefSeq) short stature homeobox protein-like
KO
K09331
short stature homeobox protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121321041
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
121321041
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MRP-L20
Formyl_trans_C_2
DUF7796
AcrF31
Motif
Other DBs
NCBI-GeneID:
121321041
NCBI-ProteinID:
XP_041115886
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All DBs
Position
9:complement(22508700..22519742)
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AA seq
284 aa
AA seq
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MEELTAFVSKSFDQKTKESSKKESITYREVLESGLARARELGNSETNLQDISETSNHCPV
HLFKEHVELEKEKMKDFNVSRASEGIYECKEKKEEVKSEDEDGQSKLKQRRSRTNFTLEQ
LNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGPA
SHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHHHLHPHLAAHAPYLMFPPPPFGL
PITSLADSASAAAAVAAAAKSNSKNSSIADLRLKARKHAEALGL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttacagcgttcgtgtccaaatcgttcgaccagaaaaccaaggaaagcagt
aagaaggagagtatcacgtacagggaagttttggagagtggtctagcgcgagccagggag
ctggggaactcagagacaaaccttcaggacataagtgaaaccagcaaccactgcccagta
caccttttcaaagagcacgtggagttagaaaaggaaaaaatgaaagactttaacgtatca
agggcttctgaaggaatctatgagtgcaaagaaaaaaaagaagaagtgaaatcagaagat
gaggatggacagagcaagctgaaacagagacggagtaggacaaattttacgttggaacag
ctgaatgaactggagagactctttgatgagacgcactatccagacgctttcatgcgagag
gagctgagtcagagactggggctgtccgaagctcgggttcaggtttggtttcaaaacaga
agagctaagtgtcggaaacaagaaaatcaaatgcataaaggtgttattttggggccagcc
agccatttagatgcctgcagagttgctccttatgtgaatatgggtgcattaaggatgcct
tttcaacaggtacaagctcaattgcagttggaaggagtcgcacatgcccatcaccacctc
caccctcacctcgctgctcacgccccttacctgatgttccctcccccgccctttggacta
ccaatcacctcgctggctgactcagcttctgctgcagcagctgtagctgctgccgccaag
agcaacagcaagaactccagtattgctgacctcaggctcaaagcacgaaaacatgctgag
gcgctgggactctga
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