Polyodon spathula (Mississippi paddlefish): 121321117
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Entry
121321117 CDS
T07273
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121321117
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121321117
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Paralog
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Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
GrpE
UNC13_3rd
TraF_2
Motif
Other DBs
NCBI-GeneID:
121321117
NCBI-ProteinID:
XP_041115954
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All DBs
Position
9:complement(51186404..51199881)
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AA seq
678 aa
AA seq
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MSFLRDQSLCEDTCSELQRAVSMETREMSESRRSSFTGRGAMARVSRFLLSIRNWARKRL
HHEEQRPDSFLERFRGPELKEASSRESNTQSALGQQGRVKSHWPSANFNVNNCNNTDEQG
ILSCHVCSLHIELFCRKKKEVFVIDPASNLYYRWLSIIAAPVMYNWCLLVCRACFDELQM
DYLVLWGVLDYSSDCVYLIDTFVRFRTGFLKQGLLVKDSKALRENYMKTLQFKFDALSLV
PTDLISIKIGSNWPELRFNRLFRFARMFEFFDRTETRTNYPNIFRIGNLVLYILIIIHWN
ACIYFAISKAIGFGTDTWVYPNISHPEYGRLARKYIYSLYWSTLTLTTIGETPPPVKDVE
YLFVVFDFLIGVLIFATIVGNVGAMISNMNASRAEFQAKIDSIKQYMHFRKVTKDLEARI
IKWFDYLWTNKKTVDEKEVLKNLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLIELVLK
LRPQVFSPGDYICRKGDIGREMYIIKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKG
SKSGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKAALEEKGKAILMKDGLIDEEVA
KQGDDPQNMQEKVDQLETVLDLMQTKFARLMAEFTSSQQKLKQRLATVESKVKKYGSASF
SEDLETDNEAAKEAKKDK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcctcagggatcagtcgctgtgcgaagacacttgctctgagctgcagagagct
gtctccatggagaccagagagatgtcagaatcccgcaggagttcattcacaggcagggga
gccatggccagggtgtctcgatttctcctttcaataagaaactgggcgaggaaacgactg
caccacgaagagcagagaccagactcctttctggagcgtttccgaggcccggagctgaag
gaggcttccagcagagagagcaacacccagtcagccctgggccagcagggcagagtgaag
agccactggccctcggcaaacttcaatgtgaacaactgcaacaatacagacgagcagggt
atactgtcttgccatgtgtgttctttacatattgaattattttgcaggaagaaaaaagaa
gtgtttgtcatcgaccctgcaagcaatctatactacaggtggctgtccattattgcagct
cctgtcatgtacaactggtgtctgctggtgtgcagggcatgttttgatgaacttcaaatg
gactacctggttttgtggggtgttttagattactcctcagattgtgtctacctcattgac
acttttgtgagatttaggacaggtttcctcaaacaaggattgctcgtcaaggattcaaag
gcgttacgggagaattacatgaagactttgcagttcaaatttgatgcactctcacttgtg
ccgacagacttaatcagcattaaaattgggtcaaactggcctgaactgaggtttaacagg
ctcttccgattcgcacgcatgtttgagttttttgaccgcaccgaaaccagaaccaattat
cccaacatctttcgaatcggcaaccttgtcctgtacatcctgattattatccactggaac
gcatgcatatactttgccatttccaaagccatagggtttgggacagatacctgggtgtac
cccaacataagccaccctgaatacggtcgactggccaggaagtacatctacagcctgtac
tggtccacactgacgctgaccacaatcggggagacccctcccccagtgaaggacgtggag
tacctctttgtggtgttcgacttcctgatcggagtgctgatcttcgctaccatcgtcggt
aacgtgggtgccatgatttccaacatgaacgcctccagagcggaattccaggccaagata
gattccattaagcaatacatgcatttccgcaaagtcaccaaagacctggaggcacgaatc
atcaagtggttcgactatctctggaccaacaagaaaacggtggatgaaaaagaggtcctg
aagaacttgcctgacaagctgaaagccgagatcgccatcaacgtccacctggacacgctg
aagaaagtgcgcatcttccaggactgcgaagcagggctgctgatagagctggtgctgaag
ctaaggccacaggtgtttagccctggagactatatctgtcgcaaaggggacattggcaga
gaaatgtacatcatcaaagaggggaagctggctgtcgtagcggacgacggcatcacccag
tttgtagttttgagtgacgggagttactttggagaaatcagcatcttgaacatcaagggg
agtaagtcggggaacagaaggactgcaaacattagaagcataggctactccgatctcttc
tgcttatccaaggatgacctcatggaagccctgactgagtatccggaggccaaggcggcg
ctggaggagaaagggaaagccattttaatgaaggacggcttgatagacgaggaggtggcc
aaacagggagacgacccgcaaaacatgcaagaaaaggtggaccagctggaaaccgttctg
gacctcatgcaaacgaaattcgccagactgatggcagagtttacctcgagccagcaaaag
ctcaaacagagactcgcaacagtggagtccaaagtgaagaagtacgggagcgcaagcttc
tcggaggatctggaaacagacaacgaagctgcaaaagaggccaaaaaggacaaataa
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