Polyodon spathula (Mississippi paddlefish): 121321141
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Entry
121321141 CDS
T07273
Name
(RefSeq) ATP-binding cassette sub-family E member 1-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121321141
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
121321141
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
Fer4_6
AAA_22
AAA
AAA_16
RsgA_GTPase
AAA_15
Fer4_2
AAA_29
NACHT
nSTAND3
Fer4_10
LdpA_Fe-S-bd
Fer4_9
AAA_23
Fer4_21
SRP54
Fer4_4
AAA_30
TsaE
ORC-CDC6-like
Fer4_7
Fer4_16
Fer4_3
AAA_19
AAA_5
Fer4_17
UDG-inhib_P56
Motif
Other DBs
NCBI-GeneID:
121321141
NCBI-ProteinID:
XP_041115974
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All DBs
Position
1:66313910..66328254
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AA seq
599 aa
AA seq
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MSEKPTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIVWISESLCIGCGI
CVKKCPFGALSIVNLPSNLAKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKFDAPPDWQEILTYFRGSELQNYFTKILEDDLKAIVKPQYVDQIPRTV
KGTVGSILTRKDDTKTEAIVCNQLDLTHLRDRNVEDLSGGELQRFACAVVCIQRADIFMF
DEPSSYLDVKQRLKAAITIRSLISPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRETSLVFKVAETANEEEITKMCRYQYPRMKKQMGDF
ELEIIEGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKF
KGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIESVIDQDVQNLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLIAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
KSTAANMPQTLLAGMNKFLGQLEITFRRDPNNFRPRINKMNSIKDVEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaagccaactagaattgccattgtgaaccacgacaagtgcaagcccaagaaa
tgcaggcaagaatgcaagaagagctgcccagtggttcgaatgggtaaactgtgtatagaa
gtcacaccccagagcaaaattgtgtggatttcggaatcgctttgcatcggttgtggtatt
tgcgttaagaaatgcccttttggagctctgtccattgttaacctgccaagcaaccttgcg
aaagagacaactcacagatactgcgccaactccttcaaacttcacaggttgcctattcct
cgaccgggtgaggttttgggattggttggcaccaacggtattggcaaatcaactgctttg
aaaatcttggcaggaaagcagaagccaaacctagggaagtttgatgctcctccggattgg
caggaaatcctaacctacttccgaggttctgagttgcagaactactttaccaagatcctg
gaagatgacctgaaggccattgtcaaaccgcagtatgtggaccagatccctaggacagtg
aaggggactgtgggatccatcttgaccagaaaagatgacaccaagacagaggctattgtt
tgtaaccaacttgacctgacccatttaagggacaggaatgtggaggacctgtcaggagga
gagctgcagcggtttgcctgcgctgtggtgtgcattcagagagcagacattttcatgttc
gatgagccatccagttacctggatgtgaagcagcgtttgaaggctgccatcaccatacgg
tccttgattagccctgatagatatattatagtagtagagcatgacttgagtgtgttggac
tacctgtctgacttcatctgctgtctgtatggagtgccaagcgcctatggagtggtcacc
atgcctttcagcgttcgggaaggtatcaatatcttcctggatggatatgtcccgacggag
aacctgcggtttagagaaacctctctggttttcaaggtggcagagaccgctaatgaagag
gagatcacaaagatgtgtaggtaccaataccccaggatgaagaagcagatgggggacttt
gaactggagatcatcgaaggggagttcacagactcggaaatcatggtcatgttgggggag
aacggaactggtaaaacaacatttatcagaatgctggccggaagacttaaacctgatgaa
ggaggagaagtgccagttctgaatgtgagctacaaaccacagaagatcagccccaagttt
aaaggaagtgtccgccagctgcttcatgagaagatcagagatgcgtacactcatccgcag
tttgtaaccgatgtcatgaaacccctgcagattgagagcgtcattgatcaagatgtccag
aatctatctggaggtgaattgcagcgtgtagctctggccctttgtttaggaaagccggca
gacgtctatctgatagatgaaccgtcagcctacttggactctgagcagcgtctcatagct
gccagagtcatcaagcgtttcatcctccatgcgaagaagactgcctttgtggtagagcac
gattttataatggcgacctacctggcagatcgtgtgattgtgtttgacggtattccatcc
aagagcacagctgccaatatgccacagacactactcgctggaatgaacaagttcttagga
cagctggagatcaccttcagaagagatccaaacaacttcagaccaagaatcaacaagatg
aattctatcaaggatgtcgagcagaagaaaagtggaaactactttttcttggatgactaa
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