KEGG T07273: 121321209

Polyodon spathula (Mississippi paddlefish): 121321209

Entry

121321209         CDS       T07273

Name

(RefSeq) beta-1,4-galactosyltransferase 4-like

K07969

beta-1,4-galactosyltransferase 4 [EC:2.4.1.90 2.4.1.275 2.4.1.-]

Organism

pspa Polyodon spathula (Mississippi paddlefish)

Pathway

pspa00533

Glycosaminoglycan biosynthesis - keratan sulfate

pspa00601

Glycosphingolipid biosynthesis - lacto and neolacto series

pspa01100

Metabolic pathways

Module

pspa_M00071

Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer

Brite

KEGG Orthology (KO) [BR:pspa00001]
09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    121321209
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    121321209
09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:pspa01003]
    121321209
Enzymes [BR:pspa01000]
2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.90  N-acetyllactosamine synthase
     121321209
    2.4.1.275  neolactotriaosylceramide beta-1,4-galactosyltransferase
     121321209
Glycosyltransferases [BR:pspa01003]
Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   121321209

SSDB

Motif

Pfam:

Glyco_transf_7C Glyco_transf_7N Glyco_tranf_2_2

Other DBs

NCBI-GeneID:

121321209

NCBI-ProteinID:

XP_041116044

LinkDB

Position

9:complement(4541745..4549460)

AA seq 210 aa
MREGMLNRSNTEEGFFDFKYPRFVLAGNVTFNRAKLLNIGYLEALKDYNWECFIFHDVDL
VPENDLNLYVCDSQPKHLVVGRNATGYRLRYKGYFGGVTAMTREQFSKVNGFSNAYWGWG
GEDDDLRIRVELQRMKIVRPSPEVARYTMIFHTRDNGNEVNKDRMRLLGRTARVWKTDGL
NSCTYKELSLERVPLYINVTVDIGKPLGHP

NT seq 633 nt +upstreamnt +downstreamnt
atgcgagaaggaatgttaaacagaagcaacaccgaagaagggttttttgactttaaatac
cctagattcgttctggctgggaatgtgacattcaatcgagccaagctactgaacataggg
tacctggaggctctgaaggactataactgggaatgcttcatcttccacgacgtcgatctg
gtcccagaaaatgacttgaacttgtacgtctgcgacagccagcccaaacacctcgtggtg
gggaggaatgctacgggatacaggctgcgctataaaggctattttggaggagtgactgca
atgacgagggagcagttctccaaagtgaatggcttttcaaacgcatactggggctgggga
ggagaagatgatgacctgaggataagggttgaacttcagagaatgaagattgttcgtcca
tcccctgaagtagcccgctacacaatgatcttccacaccagggacaatggcaacgaagtg
aataaagacaggatgcgtctcctaggccggactgcacgtgtgtggaagacggacggcctg
aattcctgcacctacaaggagctgtcactagagcgagtaccgctctacatcaacgtcact
gtggacattggcaagcctctgggacatccctaa

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