Polyodon spathula (Mississippi paddlefish): 121321283
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Entry
121321283 CDS
T07273
Name
(RefSeq) melatonin receptor type 1B-like
KO
K04286
melatonin receptor type 1B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121321283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121321283
G protein-coupled receptors [BR:
pspa04030
]
Rhodopsin family
Others
Melatonin
121321283
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
TctB
Motif
Other DBs
NCBI-GeneID:
121321283
NCBI-ProteinID:
XP_041116117
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Position
9:4263761..4275367
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AA seq
354 aa
AA seq
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MPDNVSVLRNSTELGESQAPARSSRPAWAVTALASVLIFTTVVDILGNLLVIIAVLRNRK
LRNAGNVFVVSLAFADLVVAFYPYPLVLFAIFHDGWALGDIQCKVSGFLMGLSVIGSIFN
IAGIAINRYCYICHSFAYDKLYSYRNTLLFVLLIWVLTIVAIVPNFFVGSLQYDSRVYSC
TFAQTVSSSYTIAVVVIHFLVPITVVTFCYLRIWILVIQVRRKARSEVKPRVKPSDIRNF
LTMFVVFVLFAICWAPLNFIGLAVAINPKEIAPKIPVWLFVVSYFMAYFNSCLNAIIYGL
LNQNFRKEYKRIIMSLWKPRLFFQETSKGGTDGMKSKPSPALNNNNTRVKCNSV
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgccagacaatgtttctgtccttaggaactccacggaactcggggaaagtcaagccccg
gcaaggagttctcgacctgcctgggcagtgacagcgctggccagcgtgctgattttcacc
accgttgtggatatcttgggcaatcttttggtgattattgcagtactcagaaataggaaa
cttagaaacgcaggcaatgtatttgttgtgagcctggctttcgctgatctagtggtggca
ttctacccataccctcttgtgctgtttgctattttccacgatggatgggccttgggggat
atccagtgtaaagtgagtggcttcttaatgggcttgagtgtgatcggctccatcttcaac
atcgctggtatagcaataaacagatactgctacatctgccacagctttgcctacgataaa
ctttacagctacagaaacaccctgctctttgtgttactgatttgggtgttgacgatagtt
gccattgtgccaaatttttttgtcgggtcccttcagtatgactctcgggtctactcttgc
acttttgctcagacagtgagttcgtcatacactattgctgtagtggtaatccatttcttg
gtacccattacggttgtaactttctgttatctaaggatatggatcttagtgattcaagtt
agaaggaaggccaggagtgaagtcaagcccagagtgaaacccagtgacattagaaacttt
ttaactatgtttgtggtttttgtgctctttgccatttgctgggctcctctgaactttatt
ggacttgcagtggctatcaatccaaaggagatagcaccaaaaatcccggtgtggctgttt
gttgtaagttatttcatggcttattttaacagttgccttaatgcaataatctacggactg
ctcaatcagaatttcaggaaggagtataagcgcattattatgtcactgtggaagccacgg
ctcttcttccaggagacatctaaaggaggaacagacgggatgaaaagcaagccttcccca
gctttgaacaacaacaacactcgagtgaaatgcaacagcgtgtaa
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