Polyodon spathula (Mississippi paddlefish): 121321286
Help
Entry
121321286 CDS
T07273
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121321286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
121321286
NCBI-ProteinID:
XP_041116120
LinkDB
All DBs
Position
9:complement(43566288..43568901)
Genome browser
AA seq
866 aa
AA seq
DB search
MYIWIFQIILLAVTSLTFIEMYDNYGEICQNLCSCEEKDGILTVSCENRGIVRLSEISPL
HFSMYHLLLTGNLLKKLSPDDFINYTGVIILHLGNNDIQEVETGAFNGLQGLKRLHLNNN
KIDILRDDTFVGLESLEYLQIDYNYISIIEPNTWSKLHQLQVLILNDNLLSSLPSNIFRY
VPLTHLDLRGNRLKMLPYIGLLEHMDKVVELQLEENLWNCSCELIALKAWLESISYSALV
GEVVCETPFRLHGRDLDEVSKQELCPRRVISEYEMRPHSPLSTIGYFHTTPATVTASVTS
SAVLRSSSKPTKGTRQSNKPRMRPTSRIPSKDAYNYGPIIAYQTKSPVPLECPTACTCNL
QISDLGLNVNCQERKIENVADLKPKPYNPKKMYLTGNYISVVRRSDFTDATGLDLLHFGN
NRIAVIQDRAFGDLTNLRRLYLNGNLIERLTADMFYGLQSLQYLYLEYNVIREIVLGTFQ
YVPNLQLLFLNNNLLRTLPGDIFSGLTLARLNLRSNHFTYLPVSGVLDQLRSLVQIDLYE
NPWDCTCDVVGMKIWLEQLNTGTVVNNVICGSPKKLSGEDMISIKSDFLCPDYSDIIVST
PPPSAEPVPERATTTETSIKYNTPSSSVPLSVLILSLLLVFIISVFVAAGLFVVVMKKRK
KSQSDRTSTNNSDVSSFNLQYSVYSNRSLPKVKTPGGHVYEYIPHPLGHMCKNPIYRSRE
GDSVEDYRDLHELKVTYRNNTDEERDNHLISQPYSVSTIEPREESSPVQGADTFYRGVLE
PEKQSPGNNIEYKYSGPATYTNTPNYDVRRQYLHPKRIRETVLYTTTPSTVFVEPNRNEY
LELKAKLQVEPDYLEVLEKQTTFSQF
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtatatctggatatttcaaatcatcctgttggctgttacatctctgactttcatagag
atgtatgacaattatggagaaatctgtcaaaatctttgttcttgtgaagagaaagatggg
atattaactgtgagttgtgaaaacagagggatagtcagactttcggaaatcagtccatta
catttctcaatgtatcatcttttgttaactgggaatcttttaaaaaaactgagtccagat
gattttatcaattatactggtgttatcattttacatttaggtaacaatgatatacaagaa
gttgaaacaggagcttttaatggacttcaaggattgaagagattgcatctgaacaataac
aagattgacattttaagggatgatacctttgttggacttgaaagtttggaatatctgcag
attgattataactacatcagcattattgaacccaatacctggagcaaactgcatcagctg
caagtgcttatcttaaatgataatttattgtctagtttaccaagtaacattttccgatat
gtccctttaacccaccttgatctgaggggaaacagactaaaaatgttgccctatataggc
cttttggaacacatggacaaagtagtggaattacagctggaagagaatctgtggaattgt
tcttgtgaacttattgctttgaaggcttggctggaaagcatttcttactccgctcttgtt
ggagaggttgtgtgtgaaacacctttccgacttcatggtagagatctggatgaggtttca
aaacaggaactctgtccaagaagagttatttcagaatatgaaatgagaccacactcacct
ttaagcactattggatattttcatacaacacctgctactgtgacagcttcagttacatca
tctgcagttttaagatcatcatcaaaacccacaaagggtactcgccagtcaaacaagcca
agaatgcgacccacgtctcggatcccatcaaaagacgcgtataattatggaccaataatt
gcttatcagaccaaatcccctgtgcctttggagtgtcctactgcctgcacatgcaattta
caaatttctgacctgggactaaatgttaactgtcaagaaagaaagattgaaaatgttgct
gatttaaaaccgaaaccatacaatcctaaaaagatgtatcttacaggaaattacatctca
gtggtgcgaagatctgacttcacagacgcaactggattagatttactccattttggtaac
aatcggatagccgtcatacaagacagggcttttggggatttaactaatttgcgaagactt
tacttaaatggcaatttaattgagcgactcactgcagatatgttttatggtcttcagagt
ctacagtatttgtacttagaatataatgttataagagaaattgttttaggtacctttcaa
tatgtaccaaatctccagctgctttttctcaataacaatcttctgagaactttacctgga
gacatattttcaggtttgacactggccaggcttaatcttaggagtaaccatttcacatat
ctaccagtaagtggtgtgttagatcaactaagatcgctagtacaaattgatttatatgaa
aatccctgggactgtacatgtgatgtagtgggcatgaagatttggctggaacaacttaac
acaggtactgttgtaaacaatgtgatatgtgggtctccaaaaaaattgtctggagaggat
atgatatccatcaagtcagattttctttgccctgattattctgatataatagtttcaact
cctcctccttctgcagaaccagttccagaaagagccaccaccactgaaacatctattaag
tataatacaccatcaagttccgtaccattgtctgttttaattctaagccttctattggtt
ttcatcatatcagtctttgtagctgcaggacttttcgtggtagtaatgaagaaacgcaaa
aagtctcaaagtgaccgtacaagcaccaacaattcagatgtaagttcatttaaccttcag
tacagtgtttacagcaacagatcacttcccaaagtaaagactcctggtgggcatgtgtat
gaatacatccctcatccactgggccacatgtgcaaaaatccaatttaccgatcaagagaa
ggggattctgttgaggattacagagacctacatgaattaaaagttacttacagaaataac
actgatgaggaaagagacaaccatttaataagtcaaccctacagtgtaagtaccatagaa
ccacgagaagaatcttcaccagtgcaaggtgcagatactttttacaggggtgttttagag
ccagagaaacaatcacctggaaacaatattgaatataagtacagcggtcctgctacatat
actaacacgccgaactatgatgtaaggcgtcaatatttgcatccaaaaaggatacgagaa
actgtgctgtatactacaacaccaagtactgtgtttgttgaacccaacagaaatgagtat
ctggaactaaaagcgaaacttcaagttgagccggactacctcgaagttcttgagaaacag
acaactttcagccaattttaa
DBGET
integrated database retrieval system
