Polyodon spathula (Mississippi paddlefish): 121321330
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Entry
121321330 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-10-like
KO
K06087
claudin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa04382
Cornified envelope formation
pspa04514
Cell adhesion molecule (CAM) interaction
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121321330
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121321330
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121321330
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121321330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121321330
04147 Exosome [BR:
pspa04147
]
121321330
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121321330
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121321330
Exosomal proteins of colorectal cancer cells
121321330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
121321330
NCBI-ProteinID:
XP_041116159
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All DBs
Position
9:complement(42360031..42372591)
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AA seq
296 aa
AA seq
DB search
MSGMQIVAFVGCLCGLGATLGATLSNEWKTTSRASAVITATWVFQGLWMSCAGNALGAXK
MSNMGVEMLAFTLAVSGWILISSTIPTDYWKVSSIDGTVITTATFWSNLWKTCVTDSTGV
SNCKDFPSMLALEGYIQVCRGLMIAAVCLGFFGSILALVGMKCTKIGGSDKTKARIACLA
GIHFILGGLSSVTACSLYAHRITSEFFDPTYIAQKYELGAALFIGWAGSALCILGGIAFC
FSMAGNGTNKRAGYTYNGAASFISSRTKVQNMAAADVRSARGNGNPPKHFDKNAYV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaatgcaaattgtggcttttgtagggtgtctttgtgggcttggtgctaccctc
ggtgccacgctatctaatgaatggaaaacaacgagcagggcatctgctgtcatcactgcc
acatgggttttccagggtctgtggatgagctgcgcagggaatgccttgggtgcctaaaaa
atgagtaatatgggtgtggagatgcttgccttcaccctggcggtttcaggctggatccta
atatcctctaccatacccactgactactggaaagtgtcttcaatcgatggcactgtcatt
accactgccaccttctggtccaacctctggaagacctgcgttacagactcgactggagtg
tccaactgcaaggacttcccatccatgctggcactggagggttacattcaagtctgcaga
ggccttatgattgctgctgtctgcctgggattttttggaagcatactcgccttggttggg
atgaagtgtaccaagattggaggatcagataagaccaaagctagaattgcttgtctggca
ggaatacatttcatacttggcggtttatcatctgtgacagcatgctcactgtatgcacac
agaattacatccgagttttttgaccccacttatatagcacaaaaatatgaattgggagct
gctttgttcatagggtgggcaggctcagcactctgcatccttgggggcattgctttctgt
ttctccatggcaggaaatgggacaaacaaaagggcaggttacacatacaatggagcagcc
tcatttatctcctctcgaactaaagtgcagaacatggcagcagcagatgtgaggtctgcc
agaggcaatggaaatccaccaaaacattttgacaaaaatgcttatgtttaa
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