Polyodon spathula (Mississippi paddlefish): 121321392
Help
Entry
121321392 CDS
T07273
Name
(RefSeq) bile salt export pump-like
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
121321392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121321392
04147 Exosome [BR:
pspa04147
]
121321392
Transporters [BR:
pspa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
121321392
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121321392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_15
AAA_29
ABC_ATPase
Zeta_toxin
AAA_30
AAA_16
Rad17
AAA_21
Motif
Other DBs
NCBI-GeneID:
121321392
NCBI-ProteinID:
XP_041116243
LinkDB
All DBs
Position
10:37446935..37462829
Genome browser
AA seq
1350 aa
AA seq
DB search
MPGSVSLRSIRKIGHENNSFDSSDSSVNNRHCGNVYTVNEDKKSGGKKDNETIRIGFFQL
FRFASCSEIVMMLVGSICALIHGSAQPLMLLVFGMLTDTFIEYDIELQLLQEPRLECFNN
TITWNGSDHVPYQDEMNATKSCGLLDIESEMTKFALYYVGIGCGVFLLGYVQISFWVTAA
ARQIQQIRKTYFRKVMRMDIAWFDCNSVGELNTRMSDDINKINDAISDQVGIFIQRFTTF
VCGFLMGFVRGWKLTLVIIAASPLIGVGAAFMALFVAKLTGRELQAYAKAGTVADEVLSA
IRTVSAFGGEKKEVERYDKNLVSAQSWGIRKGLIMGFFTGYMWFIIFLCYALAFWYGSSL
VIDTHEYSPGTLVQVFFGVLIGALNLGQASPCLEAFASGRGAATVIFETSDKDPEIDCMS
EAGYKLDKVKGDIEFHNVNFHYPSRPEVKILDQLSMVVRASETTAFVGPSGAGKSTAVQL
IQRFYDPKDGMVTLDGHDIRSLNIQWLRSLIGIVEQEPVLFATTIAENIRYGREDASMED
IIQAAKEANAYNFIMDLPQKFDTLVGEGGGQMSGGQKQRIAIARALVRNPRILLLDMATS
ALDNESEAVVQEALDKVRMGRTTISIAHRLSTIKNADVIIGFEHGRAVERGKHDELLERK
GVYFTLVTLQSQGDKALNEKARQMESEEAVEELALESRSISRTGSYRASLRASIRQRSRS
QLSRVMPDASMSIAGEMSQRLYSDSVGSENFRGKQAVIEEEDENIEPAPVARILKYNAPE
WPYMLFGTVGAAVNGGLNPMYSLLFSQILGTFSIPDKEEQRREIDGICLLFVLVGIISFF
TQLLQGFAFSKSGELLTRRLRRLGFQAMLGQEIGWFDDHKNSPGALTTRLATDASQVQGA
TGSQIGMIVNSFTNIGVAIIISFYFSWKLSLVILCFLPFLALSGGLQAKMLTGFAKQDKQ
AMESAGQISGEALCNIRTIAGLGKERTFVETYEAQLEAPYKSALKKAHVYGVCFGFAQCI
VFMTNSASYRYGGYLVKEEGLHFSFVFRVISAIVTSGTALGKASSYTPDYAKAKISAARF
FQLLDRVPKINVYSDEGEKWTNFKGDIEFIDSKFTYPTRPDIKVLNGLSVSVKPGQTLAF
VGSSGCGKSTSVQLLERFYDPDEGKVLIDGHDSKNINVRFLRSKIGIVSQEPVLFDCSIA
DNIKYGDNTSDLGLEDVIAAAKKAQLHDFVMSLPNQYETHVGAQGSQLSRGQKQRIAIAR
AIIRDPKILLLDEATSALDTESEKTVQAALDKAREGRTCIVIAHRLSTIQNSDIISVMSK
GYVIEKGAHEELMALKGAYYKLVTTGAPIS
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgcctggctcggtttcattacgcagcatcagaaaaattggacatgaaaacaattccttt
gattccagtgactcatctgtcaacaatcgacactgtgggaatgtgtacacagtgaacgaa
gacaagaagtcaggtggtaaaaaggacaatgagaccatcaggattggcttcttccaactg
ttccggtttgcatcctgttcggagattgtaatgatgcttgtaggaagcatctgtgcattg
atccatgggtctgcgcagcctttaatgttgctggtctttgggatgctgactgacacattt
atcgagtatgacattgagcttcagctgctgcaggagcctcgactggaatgttttaataac
acaatcacatggaatggatctgaccatgtgccataccaagatgaaatgaacgccaccaaa
tcttgtgggttgttggatattgaaagcgaaatgaccaaatttgccctgtattatgttggc
attggatgtggtgtatttttattaggatatgttcagatcagtttctgggtaacagcagca
gctcgtcagattcagcaaatcaggaagacctatttcagaaaagtgatgagaatggatatc
gcttggtttgactgcaactctgtgggagaacttaacaccaggatgtcagatgacattaat
aaaataaacgatgccatctcagatcaagtagggatcttcattcagcgatttactactttt
gtttgtggtttcctgatggggtttgttcgaggatggaagctcacactggttattattgca
gctagtccattgattggtgttggagcagcatttatggcactgtttgttgctaaactgact
ggtcgtgagctgcaagcttatgcaaaagctggtactgtagcagatgaggtactttcagct
attcggacagtgtctgcattcgggggagagaagaaggaagtggagaggtatgacaagaac
cttgtatctgcccagagctggggaatcaggaaaggcttgataatgggattctttaccggt
tacatgtggtttataatcttcctctgctatgctttagctttctggtatggctccagtctt
gttattgacacacatgaatattcacctggaactctggtacaggtgttttttggagtgctt
atcggtgccctaaacctgggccaggcatccccttgtttagaagcttttgcttcgggtcga
ggagcagcaacagttatttttgaaaccagtgataaagatccagaaattgactgtatgtca
gaggcaggctacaaattagacaaagtgaagggtgacattgaatttcataatgtaaatttc
cactacccatcaagaccagaagtcaagattttagaccagctaagcatggtcgtcagagca
agtgaaacaactgcttttgttgggccgagcggagcggggaaaagcactgcagtacagctt
attcagaggttttacgatcccaaagacggcatggtgactttggatggccatgacatacgg
agtctaaatatccaatggctgcgttcactgatcgggatagtagaacaagagcctgttttg
tttgctaccaccatagctgaaaacatccgatatggacgagaggatgcatcaatggaggac
atcattcaagcggcaaaggaggccaatgcctataacttcatcatggatttgccacagaaa
ttcgacactctggttggtgagggtgggggtcaaatgagtggagggcagaaacagagaata
gccatcgctcgagctcttgtgaggaaccctaggattctgctgctggacatggcaacctct
gcactcgacaacgagagtgaggcagtggttcaggaggctcttgataaggtgcgcatggga
cgaacaacaatctccatagcccaccgactctctacaatcaaaaatgcagacgtgatcatc
ggatttgaacatgggagagctgtagagagggggaagcatgatgaactgcttgaaaggaaa
ggggtctatttcactctagtgacccttcaaagccaaggagacaaagccctgaacgaaaaa
gctagacaaatggaaagtgaggaagcagttgaagaactcgctcttgaaagcagaagtata
tccagaacagggagctaccgtgcaagcttaagagcatctatccgtcaacggtcaagatcc
cagctgtccagagtaatgcctgacgcctcaatgtccattgctggagaaatgagccaaaga
ctctacagtgattctgtaggctctgagaatttcagggggaagcaagctgtgattgaggaa
gaagatgagaacattgaacccgccccagtggccagaatcctaaaatacaatgcacctgaa
tggccctacatgttgtttggtactgttggtgctgctgtgaatgggggacttaacccaatg
tattctctcttattcagtcagattcttgggacattttcaatacctgataaagaagaacag
agacgagaaatagatggaatctgcctgctttttgttttggttgggattatatcattcttc
acacagttgttgcagggctttgctttttcaaaatctggtgagctgctcacaaggagactt
cgtaggcttggcttccaggcaatgctggggcaggagattggctggtttgatgaccacaaa
aacagtcctggtgctttaactacaagactagccactgatgcttcccaggtccagggggcc
acaggatcccagataggaatgattgtgaactctttcaccaacattggagtggccattatc
atctccttctacttcagttggaaactgagtttagtcatactgtgcttcctgccattctta
gcattatcaggtggtttacaagcaaaaatgctgacaggatttgcaaaacaggacaagcag
gcaatggaatctgctgggcagatttcaggtgaagcattgtgtaacattagaacaatcgct
ggtttaggcaaagagagaacatttgtggaaacgtatgaagcacagcttgaagccccctac
aagtcagcacttaaaaaagcacatgtatatggagtctgctttgggtttgctcagtgcatc
gtttttatgactaattctgcatcatacagatatggtggatacttggtcaaagaggaggga
cttcacttcagctttgtgttcagagtcatctcagcaatcgtaacaagtggcacagctcta
ggaaaagcttcatcctatacgccagattatgccaaggccaaaatatcagccgcaagattt
ttccaacttcttgaccgggtacccaaaattaatgtttacagtgatgaaggagaaaaatgg
accaacttcaaaggagatattgaatttatcgatagcaaatttacatatcctactcggccg
gatataaaggtgctgaatggactgtctgtttcagtgaagcctgggcagacccttgccttt
gtgggcagcagtggctgtgggaaaagtacaagtgtccagctgctggaaagattctatgat
cctgatgaaggaaaagtgttgatagacggacatgattccaagaacatcaatgtacgtttc
ctgcggtctaaaattggaatagtctcccaagagcctgtgctgtttgactgcagtattgct
gataatattaaatatggggacaacacgagtgaccttggcttggaagacgtcattgctgca
gcaaaaaaggcccaactgcatgactttgtaatgtccttgccaaatcaatatgaaacccat
gtgggtgcccaaggatcacagctctctcgtggacagaagcaacggatcgccatcgccaga
gcaatcatccgagaccccaaaattctgttactggatgaagcaacatctgctttagacaca
gaaagtgaaaagacagtacaggcagctttggataaagccagagaaggacgcacatgcatt
gtcatcgctcatcggctttcaactattcagaattctgatattatctctgttatgtctaaa
ggttatgtgatagaaaagggagcacatgaagaacttatggccttgaaaggagcttactac
aaattggtcacgacaggagcaccaataagttaa
DBGET
integrated database retrieval system
