Polyodon spathula (Mississippi paddlefish): 121321410
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Entry
121321410 CDS
T07273
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04145
Phagosome
pspa04514
Cell adhesion molecules
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121321410
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121321410
09142 Cell motility
04810 Regulation of actin cytoskeleton
121321410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121321410
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121321410
04515 Cell adhesion molecules [BR:
pspa04515
]
121321410
04090 CD molecules [BR:
pspa04090
]
121321410
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
121321410
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121321410
Cell adhesion molecules [BR:
pspa04515
]
Integrins
Integrin beta subunits
121321410
CD molecules [BR:
pspa04090
]
Proteins
121321410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
EGF_2
I-EGF_1
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
121321410
NCBI-ProteinID:
XP_041116273
LinkDB
All DBs
Position
10:complement(26736413..26811608)
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AA seq
774 aa
AA seq
DB search
MSPYLSFLLLSLVLLDRELVLSQECTKINVNTCKDCITSGAFCAWCKQKNFTNKGEPDSV
RCDTKEQLEKRGCTETNIINPDSVFTPTLDTPLRSISQPIQLAPQQINLDLRPGKPTTFP
VRFKRAEGYPVDLYYLMDLSYSMNDDLKKVKDLGTDILKALKEITPYARIGFGSFVDKTV
LPYTNTHSDKLKKPCPDAEEHCQKAFGYQHVLSLTDDGAKFQREVSAQFISGNLDSPEGG
LDAMMQAAVCGDKIGWGNNTRLLVYTSDDGFHFAGDGKLGSILTPNDGKCHLEGNRYTKS
NELDYPSVGQLALKLDENNIQPIFAVTRNMQSVYKELSDMIPKSAVGELSADSSNVVTLI
KDAYSNLSSTVIIEHSRLPDGVSISYNSNCADEKRKNEPKGSCSNVKINNEISFDVTVTA
ERCMGPQSFEIRPLGFTEKLTVQIATPCQCECDDQRDAADCTHSGRIECGICSCNLGHVG
QNCECRVGDKTEKELTQGCRRDNGTSICSNLGDCVCGVCQCHASETPGKQIYGKYCECDN
TNCELNNGKLCGGHGKCDCGKCFCDEQHQGSACQCLKSVEGCKNSNGSVCSGRGHCECNV
CKCKSGYQPPFCEECPACPTPCPKYVACIECLGFQRGPYSKNCSESCSHITHTNVDKEVN
RKFCKEKDSENCWMIFTMEELDGENQYKAIIRSKRECPEPPNIIAIVAGTIAGVALIGLV
ILLIWKFLTLLKDRREFHKFEKEKANAKWNQADNPLFKGATTTIMNPNFLGDES
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagtccataccttagcttcctattgttgagtttggtgctactggacagggaattagtt
ctttcccaggagtgcaccaaaatcaatgtgaacacctgtaaagactgcatcacctctggt
gcattctgtgcctggtgtaaacaaaagaattttacaaacaaaggggagccagactcagtc
cgctgtgacaccaaggaacaactggagaaaagaggatgcacagagaccaacattatcaat
cctgacagtgtttttactccaactctggataccccccttagaagtatcagtcaaccaatt
cagttggcaccgcagcaaataaatctggatcttaggcctggcaagcccacaactttccct
gtgaggttcaagcgtgctgagggataccctgtggacctctactaccttatggacctctcc
tactccatgaatgatgatctgaaaaaagtgaaagacctggggacagatatactaaaggct
cttaaagagatcaccccttatgcacgaatagggtttggctcttttgtggacaaaacagtt
ttgccgtacacaaacacgcactcagacaagctgaagaagccatgtccagatgctgaagaa
cactgccagaaagcgtttgggtaccagcatgtactgagcctgacggatgatggggccaaa
tttcagcgggaggtctcggctcagttcatctcaggaaacctggactcaccagagggagga
ctagatgccatgatgcaggctgcagtctgtggggacaagattggctggggcaacaacacc
cgtctgctggtctacacatctgatgacgggtttcattttgcaggagatggcaaacttggt
tccattttgactcccaatgatggcaagtgccatttggagggaaatcggtacaccaaaagc
aatgaactggactatccatctgtgggtcagttggcactgaagctagatgaaaacaacatc
cagccgatctttgccgttaccagaaacatgcaatctgtgtacaaggaactgagtgacatg
atacccaagtctgctgtaggggagctctcagcagactccagtaacgtagtgactctcatc
aaagatgcgtatagtaacctgtcctcgacggtgattattgaacacagtcggcttccagat
ggggtttccatctcgtataactcaaactgtgctgatgagaaaaggaagaatgaacccaag
ggatcatgcagcaatgtgaaaattaacaatgagatttcttttgatgtaactgtaacggca
gaaaggtgcatgggacctcagtcctttgaaatcagacccctggggttcacagagaagcta
actgtgcaaatagcaactccctgccagtgtgaatgtgatgaccagagagatgctgccgac
tgcacccacagtggacgtattgagtgtggaatctgcagctgtaacttgggtcacgttggc
cagaactgtgagtgtcgtgtcggggataagaccgaaaaggaactgacccagggctgcaga
agagacaatggcaccagcatttgttcaaacctcggagactgtgtgtgtggtgtgtgccag
tgtcacgccagtgaaacacccggaaaacagatttatgggaaatactgtgaatgtgacaac
acgaactgtgaactgaacaacggcaagctctgtggaggacatgggaaatgtgactgtggg
aagtgtttctgcgatgaacagcaccagggcagtgcatgccagtgcttgaagtcagttgag
ggctgtaagaactccaatggaagtgtgtgcagtgggaggggccactgtgagtgcaacgtg
tgcaagtgcaagtctggctatcagccgcctttctgtgaagagtgcccagcctgcccaacg
ccttgtccaaaatatgtggcatgcattgagtgtctgggatttcaaagaggcccatacagt
aaaaattgctcagaatcatgctcacatatcacacatacaaatgtggacaaggaagttaat
agaaagttctgtaaagaaaaggactctgagaactgctggatgatcttcaccatggaggaa
ttggatggagagaatcagtataaagctattataaggagcaaacgagaatgccctgagccc
cccaacatcattgccattgtggcaggtacaatcgcgggtgtagctctcattggcttggtc
atcctgctaatctggaaattcctcaccttactgaaagaccgtcgggagtttcacaaattt
gaaaaggaaaaggcaaacgcaaagtggaatcaagctgataatccactttttaagggagca
actactactatcatgaaccccaacttcttaggcgacgaaagctaa
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