Polyodon spathula (Mississippi paddlefish): 121321415
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Entry
121321415 CDS
T07273
Name
(RefSeq) frizzled-5-like
KO
K02375
frizzled 5/8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04150
mTOR signaling pathway
pspa04310
Wnt signaling pathway
pspa04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121321415
04150 mTOR signaling pathway
121321415
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121321415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121321415
G protein-coupled receptors [BR:
pspa04030
]
Frizzled / Smoothened family
121321415
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
Myc_target_1
Motif
Other DBs
NCBI-GeneID:
121321415
NCBI-ProteinID:
XP_041116280
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All DBs
Position
10:complement(47693567..47699082)
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AA seq
575 aa
AA seq
DB search
MAPQMLKTQLFQILPWVALLFLVEVPQFASGASKELVCQEIAVPMCKGIGYNLTYMPNQF
NHDTQDEAGLEVHQFWPLVEIQCSPDLRFFLCSMYTPICLVDYKKPLPPCRSVCERAKTG
CSPLMRQYGFGWPERMNCEKLPVLGDPDNLCMDYNRTETTTTSPLFQKPTRPPKGPPKGP
GQKAADCGRQCRCREPLVQIHREAHPLYNKIKTGEVLNCAVPCYEPYFSQDERTFATFWI
GLWSILCFISTFTTVATFLIDMERFKYPERPIIFLSTCYLFVSIGYIIRLIAGHASVACN
KDYQHVHYDTTGPALCTVVFLLVYFFGMASSIWWVILSFTWFLAAGMKWGNEAIASYSQY
FHMAAWLVPSVKSIAVLALSSVDGDPVAGICYVGNQNLDNLRGFVLAPLVVYLFTGTMFL
LAGFVSLFRIRNVIKQGGTKTDKLEKLMIRIGIFTVLYTVPATVVVACYTYEQHYRESWG
KALNCACPGSEAQSGPDYAVFMLKYFMCLVVGITSGVWIWSAKTVDSWRRFSSRCCRGRK
PTSASMYSEASTAVTARTGVASSGSYHKQVPLSHV
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcagatgttgaagacgcagctttttcaaatcctgccgtgggttgctctgctg
ttcctggtcgaggtcccgcagtttgcgtctggggcctccaaggagctggtatgccaggaa
atcgcggtgcccatgtgcaaaggcatcggatacaacctgacctacatgcccaaccagttt
aaccacgacactcaggacgaggctggcctcgaggtgcaccagttctggcccctggttgaa
atccagtgctcccctgacctgcgcttcttcttgtgcagcatgtacacccccatctgcctg
gtggattacaagaagcccctgcccccctgcaggtctgtgtgtgagcgcgccaaaaccggc
tgctcccctctcatgaggcagtacggcttcggctggcctgagaggatgaactgtgagaag
ctgccggtgttgggggacccggataacctctgcatggactacaaccggaccgagaccacc
accacctcgccgctgtttcagaagcccacccgtcccccaaagggacccccgaaagggcct
gggcagaaggctgcggattgcgggcggcagtgccgctgcagggagcccctggttcagatc
caccgggaggcccaccccctctacaacaagatcaagactggcgaggtgctcaactgtgcc
gtcccttgctacgagccttacttctctcaggacgagcgcacatttgccaccttctggatc
ggcctgtggtccatcctgtgcttcatctccaccttcaccaccgtggccactttcttgatc
gacatggagcggttcaagtacccggagcggcccatcatcttcctgtccacctgctacctc
ttcgtgtccatcggatacatcatcagactgatcgccgggcacgccagcgtcgcctgcaac
aaagactaccagcacgtccactacgacaccaccggccccgcgctctgcaccgtcgtcttt
ctgctggtctacttctttggcatggctagctccatctggtgggtcatcctgtccttcacc
tggttcctggcagctggcatgaagtgggggaatgaggccatcgccagctactcccagtat
ttccacatggcggcctggctcgtccccagcgtcaagtccatcgccgtcctggctctgagc
tccgtggacggggaccctgtggctgggatctgctacgtgggcaaccagaacctggacaac
ctgcgtgggtttgtgcttgcccccctggtggtgtacctcttcactgggaccatgttcctg
ctggcaggctttgtgtctctgttcaggatcaggaacgtgatcaagcaagggggaaccaag
acggacaagctggagaagctgatgatccgcatcggcatcttcaccgtgctctacactgtc
ccggccaccgtcgtggtggcctgttacacctacgagcagcactacagggagagctggggc
aaggctctcaactgcgcctgcccagggagtgaagcccagtctgggcctgactatgcagtc
ttcatgctcaagtacttcatgtgtctggtggtgggcatcacctccggggtgtggatttgg
tccgccaagaccgtggactcgtggaggaggttcagcagcaggtgctgccgaggcaggaag
cccaccagcgcctccatgtacagtgaggccagcacggctgtgactgccaggaccggggtg
gctagctcaggctcctaccacaagcaggtgccactttctcatgtttaa
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