Polyodon spathula (Mississippi paddlefish): 121321578
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Entry
121321578 CDS
T07273
Symbol
elp1
Name
(RefSeq) elongator complex protein 1
KO
K11373
elongator complex protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121321578 (elp1)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
121321578 (elp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR35_TULP_N
Beta-prop_EML_2
Beta-prop_WDR19_1st
TPR_GEMI5
Beta-prop_NUP159_NUP214
nec1
Motif
Other DBs
NCBI-GeneID:
121321578
NCBI-ProteinID:
XP_041116520
LinkDB
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Position
1:68550038..68586033
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AA seq
1328 aa
AA seq
DB search
MRNLKLLKSLQCGSLQGFGSPQCFTIRSDTGTVLVGSDRGLSELDPRGEQVVNEVSLTSD
NYLPEDGSGMVVGIQDLPDQESVCVATATGDVILCNLSTSQLECVGSVDSGLTGMSWSPD
QELVILTTGQETIIMMTKDFEPITEVKIHQEDFGEGKFVTVGWGKKETQFHGSEGKQAAQ
RKLTEVQPAVPWDDQRQRVTWRGDGQLFALSAVCPETGARKVRVWNRECVLQSTSENVSG
LEQSLCWKPSGSLIASTQRKPNKHDVVFFERNGLLHGEFTLPFGKDQVMVKELLWNNDST
VLAVWLEDIPSDGNNKPNTYVQLWTVGNYHWYLKQSLHFGNAPESAVVSVSWDPETPYRL
HVLSRGWQYLCYDWHWSTECSTGEDSEDAANVAVIDGDKVLVTTFRQCVIPPPMCTYELQ
LPCAVNQVTFHPEPGSTNQLAVFTADNRLSIYRHGNDTNKDPTVKIGAVGGNGFKVTTAT
PVLDKTYSVVLGKKDAEGGNPLQLHLLTWLKDDTFLAVSPGERTSQSCILQLAPTGADHM
EVRSAVPVDGHVISICYNQKTRTVAMQLEDGQIMRYLWESSGSPVEVWRNSSGCVTQFPQ
PCVQTALGTIAGEEQVLGLTDRSRFFINDTEIASNITSFRLYDEFLLLTTHSHTCRCIRL
QEVSIKGLLSALSTDANQNDETVRRVERGSRIVTVVPQDTKLILQMPRGNLETIHHRALV
LAQVRKWLDRLMFKDAFDCMRKLRIDLNLICDHNPKVFLENVELFLKQINSVNHVNLFLT
ELREEDVTKTMYPCPSSSAVQTAPQFEGKKVDIVCDALRVAMEKMDPNKHCLSVLTSYVR
KSTPQLEIALQKVHELRVNPLVVPGAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVIM
VAEKSQKDPKEYLPFLNTLKKMETNYQRYTIDKHLKRYKKALHHLSKCGQEHFAEFLKLV
RDQKLYNEALKMYPVECQEYKEVCCAYGEYLSEQQHQEQAGLLFSRCGETQRALDAFVSS
TSWQHALCMAAKLGFPEDKLANLARSLAEKLLEQRRHSEAALLLEHYAKDCEEAITALIE
GATWDEALRLVYLYNRHDILETNLKPALLEAHNNQTSFVESQKTIFVRHKNRLAVVRELK
EAARQELLDYEMPDCPDSDLFSEASSVMTASNMSSKYSHSNSKISARSSKNRRKAERKKH
SLKEGSPLEDVALLQALGEIVRSVNKLTGEVHSLLKALVLFGYDSQALKLQQTLEETLQL
MDKSIPEIWQVGLQQNTGTPVLGPNSTANSIMASYQQPKPPTLPQQDTELFIPPKMSKNV
KWKLNLLE
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatcttaaactgctgaagagcctgcagtgcggcagtctgcagggttttggcagc
ccacagtgcttcacaatacgctcggataccgggacggtacttgtgggatcagaccgcggt
ctttctgagcttgatccaagaggggagcaggtggtaaacgaggtatccctcacttcagat
aactatctcccagaagatggcagtggaatggtcgttgggattcaggatctgccagaccag
gagtcagtctgtgtggcaacagcaaccggggatgttatcctgtgtaacctgagcacaagt
cagctagaatgtgtcggcagcgtggacagtggacttacaggcatgagctggagtccagac
caagagcttgttatcctcactacaggacaggagaccataatcatgatgacaaaggacttt
gaaccgattactgaagtgaagatacatcaagaggacttcggtgaaggaaagtttgtcact
gttggctgggggaagaaagaaacacagttccatggatcagagggcaagcaagctgcccag
cgcaaactgacagaggtacagcccgctgtgccctgggatgaccaaagacagcgtgtcact
tggaggggagatggccagctttttgcattgagtgctgtatgtccagagactggtgcccgg
aaggtgagggtttggaacagagagtgtgttctacagtctactagcgagaatgtcagtggg
ctagaacaatcactttgctggaaaccctctggaagtctgattgcgtcgacacagaggaaa
cctaacaaacatgacgtggtgtttttcgaaaggaatgggctcctgcatggagaattcacc
cttccttttggcaaggatcaagtcatggtgaaggagctgctgtggaacaatgactcgaca
gtgctggcagtctggctggaagatataccctcggatggaaacaacaaaccaaacacctat
gtccagttgtggacagtagggaactaccattggtatttgaagcagagtcttcatttcggg
aatgctccggagagtgctgtggtgtctgtgagctgggatccagagactccctatcgcctg
catgtcctgagccgtggatggcagtacctgtgctatgactggcactggagcacagagtgc
agtactggggaggactctgaggatgctgctaatgtggctgttatagatggagacaaggtc
ctagtgaccacgttccgacagtgtgtgataccccctcccatgtgtacctacgagctgcag
ctgccgtgtgcggtgaaccaggtcaccttccaccccgagccggggagtaccaaccagcta
gctgtgttcacagccgacaaccgcctctccatctacagacacggcaacgataccaataaa
gatccaacagttaaaatcggagcagtcgggggaaatgggtttaaagttaccacagctact
cctgtactggataaaacatacagtgttgtgcttgggaagaaggatgccgaggggggcaat
cctctacaactgcaccttctgacctggcttaaggatgacactttcctggctgtgagtcct
ggagagcggacctcccagtcctgcatcctccagctggcccctacaggggcagatcacatg
gaagtcaggtcggctgttccggtagatggtcatgtgatcagtatttgttacaaccagaag
accaggacagtggctatgcagctggaggatggacagataatgagatacttatgggagtct
tcagggtcacctgttgaagtgtggcggaacagcagtggctgtgttacacagttccctcag
ccttgtgtgcagactgccctaggcactatcgcaggggaggagcaggttttaggactcact
gaccgatctcgcttttttatcaatgatactgagattgcctcaaacatcacctcctttaga
ctctacgatgagtttcttctgcttacaacccattcacatacttgcaggtgcatacggtta
caagaggtttcaataaaaggtttgttatctgcactgagcactgatgccaaccaaaatgat
gagacagtccgcagagtagagagagggtctcgaattgtcactgtggtaccccaggacaca
aaactcatcttgcagatgccacgagggaaccttgaaacaattcaccaccgagctctggtg
ctcgcccaggtcagaaaatggttggacaggctgatgttcaaagatgcctttgactgtatg
aggaagctcaggattgacctcaacctgatctgtgaccacaaccccaaggtgtttttagaa
aatgtggaactgttcctgaagcagataaactcagtaaaccatgtgaacctgttcctaaca
gaattaagagaagaagatgtgaccaagacaatgtacccatgcccatcctccagtgcagtt
caaacagccccgcagtttgaagggaagaaagtggacattgtctgtgatgcactgagagtg
gctatggagaaaatggatcctaataagcactgtttgtctgtattgacttcatatgtgaga
aaaagtaccccgcaactggaaatagctcttcaaaaagtccacgaattaagagtaaacccc
cttgtggttcccggggcagtcagtgcagaggaagctctcaagtacttgctgttcctggtg
aatgtaaatgaactctacgaacactctctgggaacatacgactttgacctggtcatcatg
gttgcagagaagtctcagaaggatccaaaggaatatctaccatttttaaataccctgaag
aaaatggaaaccaactaccagcgatacaccatagataagcatttgaagcgatacaaaaag
gctcttcatcatcttagcaaatgtggtcaagaacactttgcagaatttctaaaactggta
agggaccaaaagttatacaacgaagccctaaagatgtatccagttgagtgccaagagtac
aaggaggtatgctgtgcctatggggagtacctgagcgagcagcagcaccaggagcaggct
ggcctcctcttctctcgctgtggggagacccagagggctctcgacgcctttgtgtccagc
accagctggcagcacgccttgtgcatggcggcaaagctcggctttcctgaggacaagctg
gctaatctggcccgcagcctggcggaaaaattgctggaacaaagacgacattctgaagca
gcccttcttcttgagcattatgccaaggactgtgaggaagccatcactgctctgatagaa
ggtgcaacctgggatgaagctttaagactggtttacttatataacaggcatgatattttg
gagacaaatctaaaacctgctttactggaagctcacaacaaccagacgtcatttgttgag
tctcagaagacgatattcgtgcgccataaaaatcgcttggcagttgtacgcgaactgaaa
gaggcggccaggcaggaacttctagattatgagatgccagactgcccagactctgaccta
ttctcagaggccagcagtgtgatgacagccagcaacatgagttccaagtactctcacagc
aattctaagatctctgcgaggtcttccaagaatcgtcggaaagctgagcggaagaagcac
agcctgaaggagggcagcccactggaggatgtggctctgctgcaggctctgggagagatc
gtccggtccgtcaacaagttaacaggagaggtgcatagcctgttgaaagctctggttctt
ttcggatatgacagccaagccctgaaactacaacagactttagaagaaacattgcaactg
atggacaaatccatccctgaaatctggcaggtgggcctccagcaaaacacaggcactcca
gttcttggtccaaattcaacagctaatagcataatggcctcataccagcagccaaaacca
cctacgctgccccagcaagatacagaacttttcattcccccaaaaatgagcaagaatgtc
aagtggaagctgaatcttctggagtag
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