Polyodon spathula (Mississippi paddlefish): 121321580
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Entry
121321580 CDS
T07273
Name
(RefSeq) homeobox protein MSH-C-like
KO
K09341
homeobox protein MSX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121321580
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
121321580
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
121321580
NCBI-ProteinID:
XP_041116518
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All DBs
Position
10:10153465..10155587
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AA seq
272 aa
AA seq
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MAPFSSVMNPVHGPFSQDLKEHEREDSEKEDGPLKDNNVIKGCKGKALSLPFSVESLISK
RSPCRTQYSPNEQGLVPTKPVADQPRSPRAISADKCVPVESFPNLTESPKTDIEDFSDKD
QSTWFQNSSFSTPPRHSSPPPCTLRKHKNNRKPRTPFTTSQLLALERKFRQKQYLSIAER
AEFSNSLNLTETQVKIWFQNRRAKAKRLQEAELEKFKLATKPLLPSFAFPFPLGAHLGSP
SLYGPPSSFQRPALPVPGLFGAPVTYGMYYLS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggcccctttctctagtgtcatgaatcctgtacacgggcctttctctcaagatctaaag
gagcacgaaagagaagattcagagaaggaagatggtccattaaaagataacaacgttatc
aaaggatgtaaaggcaaggcactcagtcttccttttagtgtagaatctcttatttccaag
agatcgccttgcaggactcaatattcgccaaatgaacagggtctggttcccactaagccc
gttgctgatcagcctcggtcaccaagggcaatttctgcggataaatgcgttcctgtggag
agttttccaaacttaacggagtctccgaaaactgacatcgaagattttagtgacaaggac
cagagcacttggtttcaaaattcatctttctcaactccacccagacactccagccccccg
ccttgtacattaaggaaacacaagaacaacagaaagcctagaaccccgttcaccacctcg
cagttgctggctctggagagaaaattccgacagaaacaatacctttccatagcggagaga
gcagaattctccaactccctaaacctcacagaaacacaggtgaaaatatggttccagaac
agaagagctaaagccaaaagacttcaagaggctgaactagaaaagttcaaattggccacg
aagccactgctgccgtcctttgcctttccgttcccactcggtgcgcaccttggttcacct
tcactgtacggaccgcccagctctttccagagacccgcgctgccagtcccaggactcttc
ggtgcgccagtgacatatggaatgtactatctatcataa
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