Polyodon spathula (Mississippi paddlefish): 121321623
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Entry
121321623 CDS
T07273
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 5-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00061
Fatty acid biosynthesis
pspa00071
Fatty acid degradation
pspa01100
Metabolic pathways
pspa01212
Fatty acid metabolism
pspa03320
PPAR signaling pathway
pspa04146
Peroxisome
pspa04216
Ferroptosis
pspa04920
Adipocytokine signaling pathway
Module
pspa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121321623
00071 Fatty acid degradation
121321623
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121321623
09143 Cell growth and death
04216 Ferroptosis
121321623
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121321623
03320 PPAR signaling pathway
121321623
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspa01004
]
121321623
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121321623
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121321623
Lipid biosynthesis proteins [BR:
pspa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121321623
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of breast milk
121321623
Exosomal proteins of breast cancer cells
121321623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121321623
NCBI-ProteinID:
XP_041116561
LinkDB
All DBs
Position
10:complement(1721605..1738748)
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AA seq
654 aa
AA seq
DB search
MNCILQFLFSPLPTPAIIGLFTFGAGVLCWLITRPKPIIPPVDLNKQTVGTKDGARRSAL
LRDDTLMSYYYDDARTLYDGFQRGLQVSGDGPCLGYRKPNQPYQWLSYKQVSDRAEYLGS
ALIHRGLKASPEQLVGIFAQNRPEWIIAEYACYTYSMVVVPLYDTLGPEALVFIINKADL
STVICDRPDRAHVLLSNCEKSLTPVLNTIILMDPFNTELKERGAKCGVEILSLQEAEVLG
KENWRKPILPQPEDLSVVCFTSGTTGDPKGAMLTHENVIADAAAFIKSFESTFGPVPEDI
SISFLPLAHMFERVVQTVMYNSGARVGFFQGDIRLLPDDMKALRPTVFPVVPRLLNRVYD
KVHFTSFKTILTVLFSLKGTMGGRVRVMVTGAAPISPTVLNFLRAALGCPIFEAYGQTEC
TAGCTFSMPGDWTSGHVGPPVTCNIVKLSNVEEMNYFASNGEGEVCIKGKNVFKGYLKDP
EKTMEALDENGWLHTGDIGKWLPSGVLKIIDRKKNIFKLAQGEYIAPEKIENVYVRSGPV
AQVFVHGDSLKSCLVGIVVPDPEVLPDFAAKRGIKGSFEDLCKNNDIKKAIQEDMLKLGK
ESGLHSFEQIKNLHLHPEQFTIENGLLTPTLKAKRAELTKVFKAEIEKLYVSLQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtattctgcagtttttattttccccgctccccactcctgccattattgggctc
ttcacatttggggctggtgtcctgtgctggctgataacccgacccaagcctatcatacct
ccagtagaccttaataagcagacagtgggaaccaaggatggtgcaagaagaagtgctctg
cttagggatgatacactcatgtcatattattatgatgatgccaggacgctatatgatggt
ttccagaggggactacaagtgtctggggatggaccttgtttaggctacagaaaaccaaac
cagccttaccagtggctgtcatacaaacaggtgtctgacagagctgaatacctgggctct
gcgctgatacacagaggactgaaagcatctcctgaacaacttgttggcatatttgctcag
aacaggcctgagtggattattgctgagtacgcctgttatacctactccatggtggttgtt
ccactgtacgacacactaggacctgaagctctcgtatttataattaacaaagctgattta
tcaacagttatatgtgacagacctgacagggcccatgtgctcctgagtaactgtgagaaa
agcctgacgccagtcctcaacactatcatcctcatggatccattcaacactgagctcaag
gaaagaggggcaaagtgtggagttgaaatcctgtctctgcaggaagctgaggttttaggc
aaagaaaactggagaaaaccaattctgcctcaaccagaggatctcagcgtcgtgtgcttc
acgagtggaaccacaggtgatcctaaaggagcgatgttgacccatgaaaatgtaatagca
gatgctgctgcttttattaaaagctttgagagcacttttggcccggtgcctgaagacatc
tctatctcattcctaccccttgcacacatgtttgagagggttgttcagactgtaatgtac
aacagtggggccagggtggggttcttccagggggatatccgactgctgcccgatgacatg
aaagccctgcggcctacagttttcccagtggtgccgcgcctgctcaacagggtctatgac
aaggtgcatttcaccagttttaagacgattttaacagtcctgttctctctaaagggaacc
atgggtggacgtgttcgtgtgatggtcactggggcagctccgatctctccaactgttctc
aactttctcagagcagcccttggatgtccgatttttgaggcttatggacagactgagtgc
acagctgggtgcaccttttccatgcctggggactggacatcaggccatgttggcccacca
gttacatgcaacatagtaaaactgtccaacgttgaagaaatgaactattttgcttctaat
ggagaaggagaggtctgtataaaaggcaaaaatgtattcaagggatatctgaaagatcca
gagaaaacaatggaagctcttgatgagaacggatggttacacaccggtgatattggaaag
tggctgccaagtggcgttcttaagattattgacagaaagaagaacatcttcaaattggca
caaggagaatacattgctcctgaaaagattgagaacgtgtatgtgagaagtggccctgta
gctcaagtgtttgtgcatggagacagcttgaagtcttgcttggtgggtattgtggtacct
gatccagaggtgcttccagattttgctgccaaaagaggaattaaaggatcttttgaagac
ctctgtaagaataatgacattaagaaagcgatccaagaagatatgttgaagttgggaaaa
gagtcggggcttcattcttttgagcagattaagaacctacatctccacccagaacagttt
accattgaaaatggactactgaccccaactctgaaggcaaaaagagcagagctaaccaaa
gtcttcaaagctgaaatcgagaagctctatgtatcactgcagtga
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