Polyodon spathula (Mississippi paddlefish): 121321643
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Entry
121321643 CDS
T07273
Name
(RefSeq) LIM domain-binding protein 3-like
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121321643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121321643
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121321643
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Ortholog
Paralog
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Motif
Pfam:
LIM
LIM_FHL2-3_N
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
121321643
NCBI-ProteinID:
XP_041116577
LinkDB
All DBs
Position
10:complement(8044891..8057018)
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AA seq
405 aa
AA seq
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MSPLSHVFLVNFLWCRNSVSAFARPPTTALEALAITPVFRTRNLPKRTASAPSLPRGTAR
PQSASFNMQSSSSYSVQSKTTTTSSFPQQRAVPTPASPPKVVSTINIVPTAYIPIPAPAP
VYTPAPAPVYNPTPAPAPTAAPASASSGRPPWVTDDSFAQKFVPGTSTTTLTKHIQPLPQ
AAPLPPAIIPNSSLPQHPAPTAPFSTPSVGRGILQRAERFPAGNRTPLCSSCNGIIRGPF
MVALGRSWHPEEFNCHYCHTSLADVSFVEEQNNVYCEGCYGEFFAPTCARCSTKIMGEVM
HALRQTWHTTCFVCAACSKPFGNSLFHMEDGEPYCEKDYVALFSTKCHGCDFPVEAGDKF
IEALGQTWHDSCFVCAVCNVNLEGKPFYSKKDKPLCKKHAHAINV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctctctcacgtgtttcttgttaactttttgtggtgtagaaacagtgttagt
gccttcgccaggcctcccaccacagcccttgaggctctggccatcacccctgtgttccgc
accagaaacctgcccaagcgaaccgccagcgccccctccctcccccgtgggacagccagg
ccacagagtgccagcttcaacatgcagtcctcctcctcctacagtgtccagtccaaaacc
accacgaccagctccttcccccagcagagagcagtgccgaccccagcctctcctccaaag
gtcgtcagcaccatcaacattgtgcccactgcctacatccccatcccagccccagctcca
gtatatacccctgccccagctccagtatataaccctaccccagccccagccccaactgct
gcccctgcctcggcctcctctggtcgccccccctgggtgacagatgactccttcgctcag
aagtttgttcctgggacgagcaccactaccctcaccaaacacatccagcctctcccccag
gctgcaccccttcctcctgccatcatccccaactcctccctcccccagcacccagccccc
accgcccccttctccaccccctccgtaggccgcgggatcttgcagagggcagagcgcttc
ccggctggcaaccggaccccgctgtgtagctcctgcaacggcatcatcaggggtcccttc
atggtggcgctggggcgctcctggcacccagaggagtttaactgccactactgccacacc
tccctggcagacgtgtccttcgtggaggagcagaacaacgtgtactgcgagggctgctac
ggggagttcttcgctcccacttgcgcccgctgcagcaccaagatcatgggggaagtgatg
catgcactgaggcagacctggcacaccacctgcttcgtgtgcgctgcctgcagcaagccc
ttcggaaacagcctcttccacatggaagacggagagccctactgtgagaaagactatgtc
gctctgttcagcactaagtgccatggctgtgacttcccagtggaagcaggagacaagttc
atcgaggccctgggacagacctggcacgactcctgcttcgtctgtgcggtgtgcaacgtg
aatctggaaggaaagccattctactccaagaaggacaaacctctgtgtaaaaagcacgct
cacgccatcaacgtgtag
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