Polyodon spathula (Mississippi paddlefish): 121321692
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Entry
121321692 CDS
T07273
Symbol
atrnl1a
Name
(RefSeq) attractin-like protein 1 isoform X1
KO
K24332
attractin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pspa04091
]
121321692 (atrnl1a)
Lectins [BR:
pspa04091
]
C-Type lectins
Others
121321692 (atrnl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_5
Kelch_3
EGF_LMN_ATRN
Kelch_4
Kelch_6
CUB
PSI
EGF_TEN
Kelch_2
NANM
EGF_Teneurin
EGF_2
EGF_laminin
TMEM100
PSI_integrin
Motif
Other DBs
NCBI-GeneID:
121321692
NCBI-ProteinID:
XP_041116626
LinkDB
All DBs
Position
10:complement(761548..924871)
Genome browser
AA seq
1365 aa
AA seq
DB search
MDMLRRGLQLYKRQKYPHAGWVDVNRYLLLYVLLYLVLHAEASLPRSCDKNCHSGRCFNG
TCICDQGWVGEQCRHCQGRFKLTEPSGYLTDGPIHYKYKTKCTWLIEGYPNAVLRLRFNH
FATECSWDHMYVYDGDSVYAPLIAVFSGLIVPEVRGNETVPEVVTTSGYALLHFFSDAAY
NLTGFHIFYSMNSCPNNCSGHGKCTTGNSIASRVYCECDKYWKGEACDIPYCKNNCGSPD
HGYCDLTGEKLCVCNDSWQGPDCSLSVPSTESYWVLPNVKPFSPSVSRTSHKTVMHGKFM
WVIGGYTFNYSSFQMVLNYNVESSIWNVVPINSGPLQRYGHSLALYQGDIYMYGGKMETS
NGNVTDELWVFNIPSQTWSAKSPTVLVHGQQYGVEGHSAHIIELDSGEVMMILIFGYSAV
YGYISNVQEYNLRTNTWLVPETKGAIVQGGYGHSSVYDRMTKCVYVHGGYKALPANKYGL
VDDLYRYEVRTRTWTILKESGLARYLHSAVIVSGVVLVFGGNTHNDTALSNGAKCFSSDF
IAYDIACDEWKMLPKPNLHRDFNRFGHSAVISNGSMYVFGGFSSVLLNDVLVYKLPNCEA
FRAEKPCLDAGSGIRCLWDGERCVSWDPRHTNGTFPRIQCPQKKMSADDRCYRYTDCASC
TANTNGCQWCEDKKCISASSNCTVSVKNYTKCHVRNEQICTKLTSCKSCSLNLNCQWDQR
QQECHALPAHLCGEGWNHVGDACLRINASRDSYDNAKLYCYNLSGNLASLTTSKEVDFVL
DELHKYTVQKISPWVGLRKINISYWGWEDMSPFTNTTVQWQPGEPNDSGFCAYLEKAEVA
GLKANPCTAMADGLICEKPVVSPNQNARPCKTPCSLRTTCSNCTSQGMECMWCSSAKRCV
DSNAYVISFPYGQCLEWQTGNCLPQNCSGLRTCSLCLEQPGCGWCNDPSNTGKGQCIEGS
SRGPMKGIGKQGQDLVLDQGLCPKDKSFEWAFIHCPACQCNGHSTCVNSSVCEQCRNLTT
GKQCEACMAGYYGDPTNGGKCQGCKCNGHANSCHSQSGKCFCTTKGIKGDQCQLCDSENR
YLGNPLRGTCYYSLLIDYQFTFSLLQDDDKHYTAINFMANPEQPNKNLDMSINASNNFNL
NITWSVGSTAGTISGEEIPIVSRSNIKDYRDSFSCEKFSFRNNLNITFYVYVSNFSWPIK
IQIAFSQHNSIMDLVQFFVTFFSCFLSLLLVAAVVWKVKQTCWASRRREQLMRERQQMAS
RPFASVDVALEVAGGEQTDPLRGPLEGAPKPIAVEPCSGNKAAVLTVFMRLPRGSSEAPP
PGQSGLAIASALIDISQQKPMDCKEKSSGVRNRKQPPPTHQGTCV
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcttagaagaggactgcagctttacaaaaggcaaaaatacccgcatgctgga
tgggtcgatgtcaacagatatttattgctttatgttttgttatatctggtgcttcatgcc
gaagcgtccctcccaaggtcctgcgataagaattgccattctggaagatgtttcaacggg
acgtgcatctgtgatcagggatgggttggagagcagtgtcgtcactgccagggcaggttt
aaattaactgaaccttctggatatttaacagatggaccaatacattataaatataaaaca
aagtgcacctggttaatcgagggatatcctaatgcagtgttaaggttacgatttaaccac
tttgctaccgagtgtagctgggaccatatgtatgtatatgatggagactctgtatatgca
cctttaatagcagtgtttagtggtcttatagtcccagaggtgcgagggaacgagactgta
ccggaggtagttaccacttctggatatgctttgctacacttttttagtgacgctgcttac
aatttaactggattccacattttttactcaatgaattcctgccccaacaattgttcaggc
catgggaagtgtacgacaggtaactcgattgccagcagggtgtactgtgaatgtgacaaa
tactggaaaggggaggcatgtgacattccctattgcaaaaacaactgtggcagccctgac
cacggatattgtgacctgacaggggagaagctgtgtgtttgcaatgacagctggcaaggt
ccagattgctctctatcagtcccttctacagaatcatactgggtgctgccaaatgtgaaa
ccgttcagcccgtccgtcagccgtacttcccataagactgttatgcacgggaaattcatg
tgggtgattggaggctacacgttcaactacagctccttccaaatggttttaaattacaat
gttgagagcagtatatggaatgttgtaccaattaacagtggccctctccagaggtatggg
cactctctcgctttgtatcagggtgacatctacatgtatggaggcaaaatggaaaccagt
aatgggaatgtcacagatgaattgtgggtattcaacatccccagccagacctggtctgca
aagtctcccacggtgctggtgcacggccagcaatacggcgtggaggggcactctgctcat
atcattgagctggacagtggagaggttatgatgatcctcatttttgggtattcggctgta
tatggctacatcagcaatgtgcaggagtacaatttaaggactaacacatggttagtgcca
gagactaaaggagccattgtccaaggtggttatggccacagcagtgtttatgatagaatg
acaaaatgtgtttacgtgcacggaggatacaaagctctcccagcaaataagtacggcttg
gtggacgatctctatagatacgaagttcgaacccggacatggacaatcttgaaggaaagt
gggctggcgcggtacctccattcggctgtcatcgtcagtggtgttgtgcttgtctttgga
ggaaacacacataatgatacagctctgagcaacggggcgaagtgcttttcatctgatttc
atagcgtacgacattgcctgtgatgaatggaaaatgttgccaaaacccaatttgcacaga
gacttcaaccgctttgggcattctgcggttatcagtaatggatccatgtatgtgtttgga
ggtttctccagtgtgctcttgaatgacgtcctggtttacaagctgcccaactgtgaggct
ttcagagcagagaagccgtgcctcgacgcgggctcaggaatccgctgtctttgggatgga
gagcgctgtgtgtcctgggatccccgtcacaccaatggcactttcccacgcattcagtgc
ccgcaaaagaaaatgtctgcggatgacaggtgttacagatacactgactgtgccagctgt
acggcaaacaccaacggctgccagtggtgtgaagacaaaaagtgcatttcagcatccagc
aactgcactgtgtctgtgaagaattatacaaagtgccatgtgagaaacgaacagatctgc
acgaagctgaccagctgcaagagttgctctttaaacctgaactgccagtgggatcagcga
cagcaggagtgccatgcgctgcctgctcatctctgtggagagggctggaaccatgttggg
gatgcctgtctgcggatcaatgccagccgggacagctatgacaacgccaaactgtactgc
tataatctcagcggcaacctcgcctccctaaccacttccaaagaggtggactttgtcctt
gatgaactgcacaagtacactgtacagaagatctctccttgggttgggctgcgcaagatc
aacatctcttactggggctgggaggacatgtccccgttcaccaacacaaccgtgcagtgg
cagcctggagagcccaatgactctgggttctgtgcttatctggagaaggccgaggtggca
ggtctgaaagccaatccgtgcactgcaatggcagatggcttaatctgtgagaagcctgtc
gtaagtccaaaccagaatgccaggccctgcaagacgccatgctccctgagaacaacctgc
tccaactgcaccagccaaggcatggagtgcatgtggtgtagcagcgccaagcgctgtgtg
gactccaacgcctacgtcatctccttcccatacgggcagtgcctggagtggcagactgga
aactgcctgcctcaaaactgctcaggactccgtacctgcagcctgtgtctggagcagcca
ggctgcggatggtgcaacgaccccagcaacaccggcaaaggacagtgcattgaaggctca
tcaaggggaccaatgaaggggattggaaagcagggccaagacctggtgcttgatcagggc
ctgtgccccaaggacaaaagctttgaatgggcttttattcactgtccagcatgccagtgc
aacggacacagcacgtgtgtgaacagcagcgtttgtgaacagtgcagaaacctgaccaca
ggaaagcagtgcgaggcttgcatggctggatactatggagaccctacgaacggagggaaa
tgccagggctgtaagtgcaatggacatgcaaatagttgccattcgcagtcaggaaaatgc
ttctgcactaccaaaggaatcaaaggagaccaatgtcaactgtgtgactcagaaaacagg
tatctgggcaatccgctgaggggaacatgctactatagccttctgattgactatcagttc
accttcagcctcctccaggatgatgacaaacactacactgctatcaacttcatggctaat
ccagagcagcccaacaagaatcttgacatgtctattaatgcatcaaacaatttcaacctg
aatattacgtggtcagttggttcaacagctgggaccatctcaggagaggaaatcccaatt
gtctccaggtctaacataaaggactacagagacagtttctcctgtgagaaattcagcttc
cgaaacaacctcaacatcaccttctacgtgtacgtcagcaatttctcatggccgataaaa
atacaaattgcattctctcagcacaacagcataatggacctggtgcagttctttgtaaca
ttctttagctgcttcttgtccctgcttctggtcgctgctgtggtttggaaggtaaaacag
acctgctgggcctcgagacgcagagagcagctcatgagggagaggcagcagatggccagt
cgcccctttgcttctgtggacgtggcgctggaagtagcaggaggagagcaaactgatcct
ctgcgagggccactagagggagccccgaagccgattgctgtagagccctgctccggaaac
aaggcagcggtgctgaccgtgttcatgcgtctcccaagaggctcgtcggaggcaccgcct
cctggccagtccggtctggctattgccagcgccctcattgacatctcacagcagaaaccc
atggactgcaaagagaagagctcgggagtacggaatcgaaagcagccccctccaacacat
caagggacttgtgtctga
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integrated database retrieval system
