Polyodon spathula (Mississippi paddlefish): 121321701
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Entry
121321701 CDS
T07273
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K04491
transcription factor 7-like 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
pspa04520
Adherens junction
pspa04916
Melanogenesis
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121321701
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121321701
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121321701
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121321701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121321701
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
121321701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121321701
NCBI-ProteinID:
XP_041116667
LinkDB
All DBs
Position
10:complement(1479247..1572085)
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AA seq
648 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENSSAERDLADVKSSLVNESETNQNSSS
DSEAERRPPPRSENFRDKSRESLEEAAKRQDGGLFKSPPYPGYPFIMIPDLTSPYLQNGS
LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVGPFCLEFPGQGDLSLHQFQ
LSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLQADVDPKTGEQLGQHMETLTGCS
WMLRDLNFLKSCTGIPRPPHPDISPYYPLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGF
RHPYPTALTVNASMSSFLNSRFPPHMVPPHHSLHTTGIPHPAIVTHSVKQESSQSDIGSL
NSSKHQDQKKEDEKKKQPHIKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHA
LTREEQAKYYELARKERQLHMQLYPGWSARDNYGGNQGKKKKRKRDKQQGEANEHREYFP
NPCLSLPPITDTNTPKKCRALFGLDQQSLWCKPCRRKKKCIRYIQGEGSCASPPSSDGSL
LDSPPSSPSLLASPSQDSKPQTEQMHPLSLTMKPDSLAHLSMPPSLARLENSASKTGTQN
GALEHQAVTSQQPASSPLARPSTSLLRSHNLLTGSQAQPLSLVTKSID
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctcaacggcggtggaggggacgatctgggggcgaacgatgaaatgatctct
ttcaaagacgaaggggaacaggaggaaaaaatttcggagaactcttcagcagaaagggat
ttagcagacgtcaaatcttctctagtaaacgaatcagaaacgaatcaaaacagctcgtca
gattcagaggcggaaagacggcctccacctagatcagaaaatttcagagataaatcaaga
gaaagtttagaggaggcagcaaaaaggcaagatggaggtttgtttaagagcccaccatac
ccgggttacccgtttataatgatccccgatctcacaagcccttaccttcagaatggatca
ctctctccaactgctcgaacatacctccagatgaaatggcccttacttgatgttcaagct
ggaagcctacaaagtaggcaagctcttaaggatgcaaggtccccatctccagcacacatc
gttggccccttctgcttggaattcccaggacagggagatctgagtcttcaccaatttcag
ttgtcgaacaaagtgcccgttgtgcagcaccctcatcatgtgcacccgctcacgcctctg
ataacgtacagcaatgagcacttcacaccaggaaacccccctccgcacttgcaggccgat
gtggacccgaaaacaggtgagcagcttggacaacacatggagactttgactggatgcagc
tggatgcttcgagacctgaacttcttaaagagttgcactggtattcccaggcccccacat
ccagatatttctccatattatcccttatcgccgggtacagtgggtcagatcccccatccg
ctgggatggttagtaccacagcaaggtcagccagtttatccaatcacaacaggagggttc
aggcatccatacccgactgctctcaccgtcaatgcatccatgtctagttttctcaactct
aggtttccaccacacatggtcccgccacaccatagtttacacacgacagggattcctcat
ccagctatagtcacgcactccgtcaaacaagagtcttcccagagcgacattggttctctc
aacagctcaaaacatcaggaccaaaaaaaggaggacgagaagaagaaacagcctcacatc
aagaaacctttgaatgcatttatgttgtatatgaaggaaatgagagcgaaagtagtggcg
gaatgcacgctgaaagaaagcgcggctatcaatcaaattcttggacggaggtggcatgcg
ctgactagagaagaacaggctaaatactatgagctggcaagaaaggaacgacagctccac
atgcagctgtacccaggctggtcagcaagagacaactatgggggaaaccagggtaaaaaa
aagaagagaaaaagggataaacagcaaggagaggccaatgaacacagagaatattttcca
aatccttgcctttcacttcctccgattacagatacaaataccccaaagaagtgtcgtgca
ttgttcgggcttgaccagcagagtttatggtgcaaaccatgcaggagaaaaaaaaagtgc
attcgctacatacaaggtgaaggcagctgtgccagcccaccctcttcagatggaagctta
ctagattctcctccctcttcaccttccctgctagcctccccctcacaagactctaaacca
cagactgaacaaatgcaccctctctcactgactatgaaacctgattccttggcacacctt
tcaatgccaccatctttagctcggttggaaaactctgctagcaagaccggcacccagaac
ggggcattggagcaccaagccgtcacgtcacaacagcctgcatcctcgccactggcaagg
ccatccacgtccttgttgcgttcccataacctgctcactggctcacaagcccagcctctt
tcgcttgtaaccaagtctatagattag
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