Polyodon spathula (Mississippi paddlefish): 121321708
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Entry
121321708 CDS
T07273
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_13
LRR_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
121321708
NCBI-ProteinID:
XP_041116717
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Position
10:complement(1918095..1926656)
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AA seq
578 aa
AA seq
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MSSTLGKDSKEKDLKGPSGKEREKEVKALGSFSKDGKETKTKGKDAKEGKKDSSGAPPGV
AFSVDNTIKRPNPAAGTRKKSSNAEVIKELNKCREETSTRLDLSKRSIHMLPTSVKELTQ
LTELYLYSNKLQSLPAEVGCLAGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREI
PPVVYRLPSLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLD
VAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPKSLA
KCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEH
NRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVCGL
VSLEVLILSNNLLRKLPHGVGNLRKLRELDLEENKLETLPNEIAYLKDLQKLVLTNNQLT
TLPRGIGHLINLTHLGLGENLIQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLS
IMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtacattaggcaaagactcgaaagaaaaggacctcaaaggtccttcgggtaag
gaaagggaaaaggaggtcaaagccttgggcagcttcagtaaagacggcaaggaaaccaag
accaaagggaaagatgccaaagaaggaaagaaggactctagtggggcgcctcctggggtg
gccttttctgtagataacacaataaaacggccaaacccagcagcaggtacccgcaaaaaa
tccagcaatgctgaggtgatcaaagagctgaataagtgcagggaggagacctccacacgg
ctggacttgtccaagaggtctatacacatgctccctacgtcagtcaaggagctgacacag
ctgacggaactgtacctgtacagcaacaagctgcagagcctgcccgctgaagtaggctgc
ctggcaggcttagtgacgttagccctgagtgagaactctctcaccagcttgcctgactcg
ctggacagcttgaagaaactgagaatgctggatctccggcataacaaactgcgagagatc
ccgccggtggtataccggcttccctccctcaccaccctctacctgcgatttaaccgcatc
actactgtggagaaggatatcaaaaacctgtcaaaactcaccatgctgagcatccgtgag
aacaagattaaacagctccctgctgaaataggggaattgtgtaacctcattacgctggat
gtagcgcacaatcagctcgaacaccttccgaaagagattggaaattgcacacagataact
aatcttgatttgcagcacaatgagcttctggacctccctgaaactataggtaacttgtca
agtctaaatcgcttgggtctgcggtacaacaggctgtcggctatccctaaatcattagca
aagtgcagagaattggaagagctaaaccttgagaacaataatatctctgtgctaccagag
ggtctcctgtctagcctggtcaatttgaccagtttaacactggccagaaactgcttccag
tcatatcctgtaggcggtccatcacagttttctactatatattccctcaacatggagcac
aaccgcatcaacaaaatcccctttggcatcttctccagagccaaagtgttaagtaagctg
aacatgaaggacaatcagctcacctctctgccacttgattttgggacctggactagtatg
gttgagcttaacctggccacgaaccagctgactaagattcctgaggatgtgtgcggtctt
gtctcacttgaggttctaatcctgtcaaacaatctcctacggaagctgcctcatggcgta
ggtaacctacggaaattacgagagttagacttggaggaaaataagttggaaactctccca
aatgaaattgcttacctgaaagatttacagaaactggtcctgactaataatcagctgaca
accctccccagggggattggacatctcatcaacctgactcacctgggactgggagagaac
cttatacaacacctccccgaggagatcggtacactggagaatcttgaggagctctatttg
aatgataaccccaatctccacagccttccctttgagctggctctgtgcagcaagctgtca
atcatgagcattgaaaactgccccctcagccatctccctccacagattgtcgctggtggc
ccctccttcatcattcagtttctaaagatgcagggcccttaccgtgccatggtctga
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