Polyodon spathula (Mississippi paddlefish): 121321736
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Entry
121321736 CDS
T07273
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015
mRNA surveillance pathway
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121321736
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121321736
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121321736
03036 Chromosome and associated proteins [BR:
pspa03036
]
121321736
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121321736
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121321736
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121321736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
TYW3
Motif
Other DBs
NCBI-GeneID:
121321736
NCBI-ProteinID:
XP_041116770
LinkDB
All DBs
Position
10:complement(4506563..4521176)
Genome browser
AA seq
460 aa
AA seq
DB search
MHFLHVGYSKHVYCSGVGGGNDFQWCFSQVKGAIDEDVAEADIISTVEFNYSGDLLATGD
KGGRVVIFQREQESKNRPHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNA
AHSLLSTNDKTIKLWKISERDKKAEGYNLKEEDGRLRDPFRITSLRVPVLQPMDLMVEAS
PRRIFANAHTYHINSISVNSDHETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTE
VITAAECHPNQCNVFVYSSSKGTIRLCDMRAAALCDRHTKFFEEPEDPSSRSFFSEIISS
ISDVKFSHSGRYMMTRDYLSVKVWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFE
CCWNGTDSAIMTGSYNNFFRMFDRNTRRDITLEASRESSKPRGILKPRKVCTGGKRKKDE
ISVDSLDFNKKILHTAWHPKENVIAVAATNNLYIFQDKMN
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcattttttgcatgtcgggtacagcaaacacgtttattgttcaggagtcggaggaggg
aatgatttccagtggtgtttctcacaagtgaaaggtgccatagacgaagatgtggcagaa
gctgatattatttcaacagttgaattcaactactctggagacctgcttgcaactggggat
aagggcggtagagttgtcatatttcaacgagaacaggagagtaaaaaccgtcctcactcc
agaggcgaatacaacgtttacagcactttccagagtcatgaacctgaatttgactatttg
aaaagtctagaaattgaggaaaaaattaataaaattcggtggttacctcaacaaaatgct
gctcattccctgctgtctactaatgataaaacgattaaattgtggaaaatcagtgaaagg
gacaaaaaggcagagggttataacttgaaagaggaagatggcagacttagagatcccttt
agaattacttcactacgggtgcctgttttgcagcccatggacttgatggtagaagcaagt
cccagaagaatatttgcaaatgcacacacatatcatattaactcgatttcagtaaatagt
gatcatgaaacgtacctttctgcagatgacctaagaataaacctatggcatttagaaatc
acagatcgaagttttaacattgtagatattaagcctgccaacatggaagaattgacagaa
gttataacggcagcagagtgtcacccgaatcaatgcaatgtatttgtctacagcagtagc
aagggaactatacgactgtgtgacatgcgtgcagcagccctctgcgacaggcatacaaaa
ttttttgaggaaccagaagatccaagcagcagatcattcttttctgaaatcatctcatca
atatctgatgtaaagttcagtcatagtggccggtacatgatgacaagagactatctctca
gtcaaggtgtgggatctgaacatggaaagtagaccagtagaaacataccaggtccatgaa
taccttcgcagcaagctttgttcattgtatgaaaacgactgcatttttgacaaatttgaa
tgctgttggaatggaacagatagtgctattatgactggctcttacaataacttcttcaga
atgtttgatagaaacactaggagggatatcactcttgaggcatcccgagagagcagcaaa
ccccgcggcatcttgaagccacgcaaagtgtgtactggtggcaagaggaagaaggatgag
ataagcgttgacagtctggacttcaacaagaagatcctccacacagcctggcaccctaaa
gaaaatgtcattgctgtagctgccaccaacaacttgtatatattccaggataaaatgaat
taa
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