Polyodon spathula (Mississippi paddlefish): 121321759
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Entry
121321759 CDS
T07273
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
pspa04519
Cadherin signaling
pspa04520
Adherens junction
pspa04916
Melanogenesis
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121321759 (lef1)
09133 Signaling molecules and interaction
04519 Cadherin signaling
121321759 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121321759 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121321759 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121321759 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121321759 (lef1)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
121321759 (lef1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121321759
NCBI-ProteinID:
XP_041116837
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All DBs
Position
1:69788873..69859497
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AA seq
404 aa
AA seq
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MPQLSGGGGGGGDPELCANDEMIPFKDEGDPQKEKIFAEISHSEEEGDLADIKSSLVNES
EINPNDNNHEAARRELQDSYHEKHREHCDGKHHDSLYNKGHPYPGYPGYIMMSNMNNDSY
MPNGTLSPSMVRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHSGHHPQEVNSKQDIH
RHHHPGPDMANFYSLSPGGVGQITPPLGWQGQPMYPMSSGFRQQYPSTLQSDTPMSRFSH
HMVPGPPGPHATGIPHPAIVNPQVKHEHPHDHDLMHMKPQHEQRKEQEPKRPHIKKPLNA
FMLYMKEMRANVVAECTLKESAAINQILGRRWHALAREEQAKYYELARKERQLHMQLYPG
WSARDNYGKKKKRKREKIQETTSGGKRNAFSTCKSKTATLGPPF
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaattatctggaggaggcggcggtggaggggacccagaactctgtgcaaatgat
gaaatgatccccttcaaagacgagggggacccccaaaaagagaaaatctttgcagaaatc
agtcactccgaggaagagggagatttggctgatattaaatcttctctggtaaatgagtcc
gagataaacccaaacgacaacaaccatgaggcagctagacgagaactgcaggattcttac
catgaaaaacacagagaacattgtgatggaaagcatcacgacagcttatacaacaaagga
catccttacccaggctatcccggttacatcatgatgtcaaacatgaacaatgactcttac
atgcccaacggcactctgtctccttcgatggtcagaacgtcaaacaaggtgccggtggtc
cagccgtcgcatgcagttcacccgcttactcctctgatcacctacagcgatgagcacttt
gcacccgggcctcactcgggacaccaccctcaggaagttaactccaaacaagacatacac
agacatcatcatcctggtcctgacatggccaatttctattcgctgtctcctggaggagtt
ggacagattaccccacctcttggatggcaaggtcagcctatgtatccaatgtcaagtggt
ttcagacaacagtacccctccactctccaaagcgacacccccatgtccaggttttcacat
cacatggtgccaggtccccctggaccccatgcaactggcatccctcaccctgccattgtg
aaccctcaagtcaaacacgaacacccgcatgaccacgacctaatgcacatgaaacctcaa
catgaacagagaaaagagcaagagcccaaaagacctcacatcaagaagcctctaaatgct
tttatgttgtacatgaaagaaatgagagcaaacgtagtagcggagtgtacgctgaaggaa
agtgcagccatcaatcagatcctggggaggaggtggcacgcgctagcccgagaagagcaa
gctaaatattatgaattggcccggaaggaaaggcagcttcacatgcagctttacccaggc
tggtctgcaagagacaattatggaaagaagaagaagaggaagagagagaagatccaggaa
accacatcaggaggaaaaagaaatgcattctccacgtgcaaatcaaaaacagcaactctg
ggcccccctttttag
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