KEGG   Polyodon spathula (Mississippi paddlefish): 121321794
Entry
121321794         CDS       T07273                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pspa03036]
    121321794
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121321794
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    121321794
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     121321794
SSDB
Motif
Pfam: MMS19_C MMS19_N TOR1L1_N HEAT_2 INTS7_N
Other DBs
NCBI-GeneID: 121321794
NCBI-ProteinID: XP_041116934
LinkDB
Position
10:complement(9447384..9461478)
AA seq 1024 aa
MAGNGGALLLGLVEQFVTGLQDSKAADTSAGVKKGQFTVLELVEALGPSLTSSEPQTRGR
GIQLLSKVLQQCCTSLSEKEVQVLTAFYENRLKDYYVITPHVLQGLKALTLCPVLPAGLA
VSILKSLFQDVHVQSLMQTDRSCVYNILISLMESCEEELKGLGADFVFGFVQAIDGEKDP
RNLLLAFQIAQNILYRNYELGSFTEELFEVTSCYFPIDFYPPPNDPHGISREELILSLRA
VLAGTPRFAEFLLPLLIEKLDSDVQSSKLDSLQTLAACAACYGHRELKEFLPSLWSSVRR
EVFQTASEKVESAGLSALRALTACLSRSVLDSDSEDLLNTFLDLVLKDCQHHLCEPDLKL
VWPSTKLLQAAASASYRASYKITAAVVPLLLEQYNNHTQNAQRRTLVQVLHGFIQPHQGN
HTEEGDENPLTGYRQPLCALVFSALTESSPALQTAAVKTLTALGSQPGLLSEEDIDLAAD
HLTRLVLREEEPQTCSAAMEAAGCLARLHPTAFASRMVPALKQEIFSEAMEECEGSPAAQ
SQRALRQRSLKALSAVSTHPSLVQETVPILLQALSVSHKGSASFDLEEVVSACRSLQQIT
ELAKDSEESGRYFHQSVIPRLLGLAVQASLQGGGVPNPLIEERVLSAMVPIFSTACGCLH
TQLAAHTASLVLSLFLDGDASFLPENNFPQQFQLLKERSNGWPQTQLVCLLMACVCSLPK
SVEVPKTDRLLSELEELSCSCVHPFTHTSAAKCFAGLVNKHPAGEQLDSILKRSVKRIES
GLGNDSPNRMQVYTLLLWVSKALLLRYHPLSTTLTDKLLSLLVDRELGSLAADGVALLMN
DSADVLNRACHADVRMMYRQRFFTETAPKLVLGFNCAPEERKSSYLKALSHILNSLPRQV
QITELPSLLPLLLEALSCPDLGVQLSTLSCLHPLLLDTPQVMTSHLKTLLSRLLALTTSP
AMKVRITSLQCLKALTRLPEHVVLPSRPRMLHALAVPLGDKKRLVRREAVLARGEWFLLG
SPGR
NT seq 3075 nt   +upstreamnt  +downstreamnt
atggctgggaacggaggagccttgctgctgggtttggtggagcaatttgtaaccggactg
caggacagtaaggccgctgatacatcagcaggggtgaagaaaggacagtttaccgtgtta
gagctggtggaggcattggggccaagtttaacaagctctgagcctcaaactaggggccgt
gggatccagctcctctccaaggtgctgcagcaatgctgtaccagcctgtcggagaaagaa
gttcaggtcctgacagctttttatgaaaacagactaaaggactattatgtgataacacct
catgtcttgcaggggctcaaggccctgactctgtgcccggtgctgcccgctggcctggcc
gtctctatcttgaagtctctgtttcaggatgtccatgtgcagtctctgatgcagacagac
cggtcctgtgtttacaacatcctgatcagcttgatggagtcttgcgaggaggagctaaag
ggtctgggtgcagattttgtgttcggttttgtccaagcgatagatggtgagaaggacccc
aggaacctgctgctggctttccagattgctcaaaatattctgtacaggaactatgagctg
ggaagttttacagaggagctgtttgaagtgacttcttgctatttccccattgatttttat
ccgcctccaaacgacccccatggaatcagtcgagaggagctgattctgagcctgagggca
gtgctggctggcacgcccaggttcgctgagtttcttctaccgctgctgattgagaaactg
gattcagatgtgcagagctccaagctagactccctgcagacactggcagcctgtgctgcc
tgctacggacacagagagctgaaagaattcctgccgagtctctggtcatcagttcgcaga
gaggtgttccagacagctagtgagaaggtggagagtgccggtctctctgccctgcgcgcc
ctcacggcctgcctctctcgctccgtcctcgactctgattcagaggacttgctcaacacc
ttcctcgacttggttctcaaagattgccaacaccacctctgtgagccagacctgaagttg
gtttggccgagcaccaaactcctgcaggctgccgccagcgcctcctacagggcaagttat
aaaataactgctgctgtggtgcctttgctgctggaacagtacaacaaccacacacagaat
gctcaacggcgcaccctggtacaagtgttacacgggttcatccagccccaccaggggaac
cacactgaggagggagatgaaaaccctctgactggttaccggcagcccctgtgtgccctg
gtgttctcagctctcacagagtcgagccccgcactgcagaccgcagctgttaagaccttg
actgcccttgggtcccagccaggcctgctctctgaggaggatattgatcttgctgctgat
cacctgactcgactggtcttgcgggaggaggagccacagacctgctctgcagcgatggaa
gctgctggctgtctggctcgtctgcaccccaccgccttcgcctccaggatggtcccagct
ctaaaacaagagatcttctcggaagcaatggaggagtgcgagggcagccccgctgcacaa
tcccagcgggctctgcgacagcgcagtctgaaggctctgtcggcggtatcaacccatccc
agcctcgtccaggagactgtgcctatcctactgcaggccctcagcgtctctcataaagga
agtgccagttttgatctagaggaagtggtgtctgcatgtcggagcttacagcaaatcaca
gagcttgccaaagacagtgaggagagcggacgctacttccaccagagtgtcatcccacgc
ttgctggggctggcagtgcaggcctccctacagggtggaggtgtcccaaaccccctgata
gaggagagggtgctatctgctatggttcctatcttcagtactgcctgtggctgccttcac
acacagctggccgcccacactgcatccctcgttctctccctttttctggatggagatgcc
tccttcctgcctgagaacaacttcccacagcaattccagctgctgaaggagcgatctaat
ggctggccacaaactcagctggtgtgtctcctgatggcgtgtgtctgttcactgcctaag
agtgtggaagttcccaagactgaccgcctcttgagcgaattggaggagctgagctgttcc
tgtgtccaccccttcacccacacatcggcagcaaagtgtttcgctggactggtcaacaaa
cacccagcaggggagcagctggactctattttgaagcgatctgtgaagaggattgagtct
ggattgggcaatgactcgccaaacagaatgcaggtttacacactgctgctttgggtgtcc
aaggcactcctcctgaggtaccaccccctgtccacaacacttactgataagctcctgtct
ctcctggtggacagagagctgggctccctggctgccgatggcgttgcccttctgatgaac
gactcggcggatgttttaaatcgagcatgccatgctgacgtgcgcatgatgtaccggcag
agattcttcactgagacggcacccaaattggtcctggggttcaactgcgcccctgaagaa
aggaaatccagctacttgaaggccctgtcccacatcctcaacagcttgcccaggcaggtc
cagatcactgagctgccctctctcctgcccctcctcttggaggcactgtcttgtccagac
cttggtgtccagttgtccaccctgtcctgcctacaccccctcctcctggacaccccgcag
gtcatgacctcacacctgaagaccctcctcagccgactcctggcgctgaccaccagccca
gctatgaaagttcggatcacatctctgcagtgcttgaaggcactaaccaggctccctgag
catgtggtgctgccgtcccgcccgcggatgctgcatgctctggctgtgcctctgggtgat
aagaagcggctggtgaggagggaggcagtgcttgcgcgaggggaatggtttttgctggga
agcccaggaaggtga

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