KEGG   Polyodon spathula (Mississippi paddlefish): 121321842
Entry
121321842         CDS       T07273                                 
Name
(RefSeq) protein transport protein Sec31B-like isoform X1
  KO
K14005  protein transport protein SEC31
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121321842
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pspa04131]
    121321842
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pspa02044]
    121321842
Membrane trafficking [BR:pspa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    121321842
Secretion system [BR:pspa02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   121321842
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 EIF3I WDR55 Beta-prop_EML TPR_Sec16 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_HPS5 MIOS_WD40 Beta-prop_DCAF4 Prp18 Beta-prop_DCAF12 SMAP
Other DBs
NCBI-GeneID: 121321842
NCBI-ProteinID: XP_041117042
LinkDB
Position
10:12659303..12683065
AA seq 1253 aa
MQKISRTGDTEYAEYNAHGCVFSTSTMKLKEIQRTANQAWSPASRHPTYLATGTSAQQLD
ASFSTSSALEIFELDFSDPSLDMKLRGSLSTTNRFHSLIWVDFGTATAGSSGMLVGGGDN
GAVSLYNPTQILVSEKEAIVGQCEKHTGPVRTLDFNPFKSNLLASGANDSEIYIWDLNNF
SNPMTPGTKSQPLEDVSVVAWNRQVQHILASAHPSGKAVVWDLRKNEPIIKISDHSNRMH
CSGMLWHPEVATQLVLASEDDRLPVIQMWDLRFASSPLKILENHTRGILSISWSQADPEL
LLSSAKDNRILCWNPGTGEVIYELPTSSQWCFDVQWCPRNPAILSAASFDGWISIYSVMG
GSLDAQGQGHVDKVSSSFDAMDPFGTGQSLPPLQVPQKVAQTKVILPLKKPPKWIRRPVG
ASFAFGGKLITFENPKPTQQQVPQPIPRHVFISQVITETEFLQRSSELQSALNSGSFSSY
CQAKIQKAATDSEENIWSFLKVNFEDDARSKFLRLLGYNKEELEKKIASCLGKCLQPNGY
GVDANDLAEKMQILSAQRSDESSAAGDTSSSPTSSTVSDFFSSLPNDKPKFQISTTTNTD
GLISQALLVGNFEGAVDLCLNDARFADAIILAISGGEELLKKTQLRYLATQKTGISMLVS
SIVNRNWTDIVQSCELKNWKEALAALLTYARPEEFLELCDILGTRLEHEGEERMCLRACL
CYICSGNVEKLVECWVLKNETSSPLALEDLVEKVMILRKSIEQLRGGDVVTRSTVLEEKL
TQYASLLAAQGSLAAAMSYVPASSSQLRDRLFHAQGEAVAGQQPPPFPYNRVQVMGGAHP
ASTAVPAHQLGHRTQQQGPYQPAFHPQVQPSGQHSVFTPQPKSTDSVPHSGMPAISHGPP
AGIFSRPPYIQHPTTASAFSQPFSQPGGPPSGQAAFPAHPPFLASSLSGPEPLAAQPSGL
PSMPGPTMSGPTFRPASVPSYQPSGPLPPSSQAAGLQPMFLGGARIPTSMPASQPPTTYQ
LGAGYPPGGPGAPAAKTFAAASLPPPPTGYFPWLENRCDDEGSQEGWNDPPNVRGGPRKK
KFHETYTPPAPITAPVMNFSMEHNVLQPQSSLTQETIQVPPGAPIEASIQTLHQLPAEKI
EKKEIPHEHLVLKTAFDGLVQRCLLAAGDPQTKRKLDDASKRLEYLYDKLREQALTPNIL
GGLHEIGRCIEGRNYQQALAVHTQIVSSSNFSDISAFMPILKVVMTIANKLSI
NT seq 3762 nt   +upstreamnt  +downstreamnt
atgcagaagataagcagaactggagatacagagtacgccgaatacaacgctcacggctgc
gttttcagcacatccacaatgaagctaaaagaaattcagagaacagccaatcaggcatgg
agccctgcatcccgacatcctacctacttagcaacaggtacatctgcccaacagctagat
gcatcttttagtacaagttcagccctggagatttttgaactggatttctcagatccttca
ctagacatgaagttaagaggttccctttcaaccacaaacaggtttcacagcctgatctgg
gtggatttcggaacagccacagcaggatcctcagggatgcttgtgggtgggggtgacaat
ggagctgtctctctctacaacccaacacagatactggtttcggaaaaagaggccatcgtt
ggacaatgtgagaaacatacaggccctgtccggacccttgacttcaacccctttaagagt
aaccttttggcctctggagccaatgattcagagatatatatctgggacttaaataacttt
agtaatccaatgacaccagggacaaagtcacaacctcttgaagacgtcagtgttgttgcc
tggaataggcaggtgcagcacatccttgcttcggctcaccccagtggtaaggcagttgtg
tgggacctgagaaaaaatgaacccatcattaaaatcagtgatcacagtaacagaatgcat
tgctctgggatgttgtggcaccctgaagtggccactcagctggtgctggcatcagaagat
gatcgtctgccagtaatccagatgtgggacctgcggtttgcatcttcccctctaaaaatt
ctggagaaccacacaagagggattctgtctatttcctggagccaggctgacccagaactg
ctgctcagtagtgctaaagacaacaggattttgtgctggaacccaggaacaggagaggtg
atttatgagttgccaacaagcagccagtggtgtttcgatgtgcagtggtgtcccaggaat
cccgccattctctctgctgcttcatttgacggttggataagcatttactcagtaatggga
ggaagcctagatgctcaaggacaaggccatgttgataaagtctcttcctcgtttgatgcc
atggacccttttggaactgggcagtccctccctcctctgcaggttcctcagaaagtggcc
cagacgaaagtcattcttccacttaaaaagcctcctaaatggatcaggagacctgtgggg
gcatcatttgcattcggagggaagctgataacctttgaaaatcccaaaccaacacaacag
caagtgccgcagcccattccacgtcatgtgttcatcagccaggttatcacagaaacagag
ttcctccagcgctccagcgagctccagtcagcactgaactctggaagtttctccagctac
tgccaagccaagattcagaaggcagcaacagattcggaagagaacatctggagcttctta
aaggttaactttgaagatgatgctcgcagcaaattcttaagacttctgggatacaataaa
gaagaactggagaaaaagattgcctcttgcttaggaaagtgtctacagcctaatggttat
ggggttgatgctaatgatcttgcagaaaaaatgcaaattttatctgctcagagatcggac
gaatccagtgccgcaggagatacttcatcgtcccccacatcctcaacagtgtccgacttt
ttcagcagtcttcccaatgacaagcccaaatttcagatttctacgaccacaaataccgat
ggtctaatcagccaagcactcctagtaggtaactttgaaggggctgtcgatctctgtctt
aatgatgcccgctttgctgatgctatcatcctggctattagtggtggagaggagctgttg
aagaaaacccagctgagatatctagcaacgcagaaaactggcatttcgatgcttgtgtcc
tccatagttaaccggaactggacagatattgtacagtcatgtgaattaaaaaactggaag
gaagccttagctgccctcctgacttatgcacgtcctgaggaattcttggagctgtgtgat
attctggggactcgtctggagcatgaaggagaagagaggatgtgtcttcgggcctgtctg
tgttacatctgttccgggaacgttgagaaactggttgaatgttgggtactgaaaaatgaa
acctcatcacctttggctttagaagatctggtagagaaggtgatgattttacgcaaatcg
attgaacagcttcgtggtggcgatgtggtaactcggagcactgtcctggaagagaaactg
actcagtatgccagcctgttggcagctcaggggagtcttgctgcagccatgagctatgtg
cctgcaagcagcagtcagttgcgggacaggctgtttcatgctcagggagaggctgttgca
ggtcagcaacctcctcccttcccttacaacagagtccaggtgatgggaggtgcccatcct
gcttctactgcagttccagcccaccaactgggccacagaacccagcagcagggcccatac
cagcctgcatttcatcctcaggtgcaaccttcagggcagcattcagttttcactccacag
ccaaaatcgacagactcagtgccacactcaggtatgccagccatttcccatggacctcca
gctggcatattctccagaccaccgtacattcaacacccaaccactgcttcagcattctct
caacctttcagccagccaggagggcctccaagtggacaagcagcttttcctgcccatcct
cccttcctagcttccagtctttcgggacctgagccgcttgcagcacagcccagtggccta
ccgtcgatgcctggtcccactatgtcggggcctacctttaggcctgcctctgttccctct
taccagccctctggtcctctcccgccatcctcccaggctgctggtcttcaaccaatgttc
ctaggtggtgctcgcattccgacctccatgccagcctcacagcctcccactacctaccaa
ctgggagcagggtacccaccgggtggcccaggagctcctgccgccaagaccttcgctgct
gcttctcttcctccccctccaacaggatactttccctggctggaaaatcgttgtgatgat
gaaggctctcaagaaggatggaatgatcctcccaacgtgcgaggggggccaaggaagaaa
aagtttcatgagacctacaccccaccagcccccatcacagcgcctgtcatgaacttctct
atggaacacaatgtactccaacctcagtcctctctaactcaggaaactattcaggtacca
ccaggggcacctatagaagccagtatccagacccttcatcaactaccagcagagaagatt
gaaaagaaggagattccacatgagcatctggtgttgaagacagcctttgatggactggtg
cagcgctgcctcctagctgctggtgacccgcaaacgaagagaaaacttgatgatgcttcc
aagcggctggaatacctctacgacaagctgagagagcaagcgcttactcctaacatcctc
gggggactgcacgagattggacgctgcattgagggtcgaaactaccaacaagcacttgca
gtccacactcaaattgttagcagcagcaatttcagtgacatatctgcgttcatgcccatc
cttaaagtggtaatgacaattgctaataagctcagtatatga

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