Polyodon spathula (Mississippi paddlefish): 121321846
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Entry
121321846 CDS
T07273
Name
(RefSeq) myoferlin-like
KO
K22125
myoferlin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121321846
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
Ferlins
121321846
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Motif
Other DBs
NCBI-GeneID:
121321846
NCBI-ProteinID:
XP_041117050
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All DBs
Position
10:complement(12960469..13027419)
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AA seq
2061 aa
AA seq
DB search
MLRVVVESASKLPKGSFGTPDPITTVNFKDEKKKTKSINSNLNPVWNEVLEFDLKGLPLD
SSSFITVTVKDFETIGKDKFIGSTTVFLKDLASGQVKTLPSKNLALLNEKSQPTGGTIDL
IIAYEPPPSTALPNPNDPTANSQDSGGTAGDGDEGDEEYGDGGGGGGGGGGVPASPSAGQ
PGNQLQKRLGRSKKNRRVLSNKPQDFQIRIRVIEGRQLPGNNIKPVVKVNVCGQTHRTRI
RKGNNPFFDEIFFYNVNMLPSDLFDEYISIRVYDSYSLRADSLMGEFKLDVGYVYDEPGH
SVMRKWLLLNDPDDSTSGGKGYLKVSMFIVGTGDELPVENRDTDGDQDDIESNLLLPAGV
SLRWVTFMLKLYRAEDIPQMDDAFVQSVKEMFGAENNRKNLVDPFVEVCFAGKKICSKII
EKNANPDWNQVVNLQIKFPSMCDRIRLTVFDWDRLTRNDAVGTTYLNISKIASPGGELED
SSSGYGASPASEAENTGESDGGFLPAFGPCYVNLYGSPREFTGFPDPYDDLNYGKGEGVA
YRGRVLVELTTKLDAKDDKKIDDIPNDDILVVEKYQRRRKYSMSAVFHTANMLQDVGDPI
QFEVSIGNYGNIFDSTCKPLASTTQYSCAVFDGNFYYYLPWSNIKPVVILTSYWEDISHR
MDAVNIIENITDRLQNHISSLKTALLAKVSDTRLAEIWLKLVNQVIEDLDSNPVPELEGK
ANLTTLDIQIRKMRVNALKYIKDSAIRMREEATDVKTTLMEIEDWLERMTGLVDEPQNSM
PDVIIWMLRGEKRVAYARIPAHRIMYSTTSEQACGKYCGKTQTIFMQYPMDKTKGIKLPV
QLRVNMWFGLSAHETKFNSFAEGTFSVFAEMYENQALVFGKWGTTGLVGRHKTSDVTGKI
KLKRESFMPPKGWEWEGDWFVDPERSLLTEADAGHTEFTDEVFQNETRYPGGEWKPAEEP
YTDVNGEKAQGPSEIECPPGWKWEEAWSFDTNRAVDEHGWEYGITIPPDSKPKSWVPAEK
MYHIHRRKRMVRPRKKESKASTPSEKMAAPLGDAESWEYTSLIGWKFHRKQRTTDTFRRR
RWRRKMAPSDRLGASAIFKLEGALGADISDVDEKGKSKDTATSMFGANTPTVSCNFDRPF
AYHLRVYVYQARNLLALDKDSFSDPYAHVSFLHLSKTTETIPATLNPTWDQTLIFNTVEI
YGDPQAVAQNPPNVVFELFDKDQVGKDEPLGRSVCPPLVKLNPETGVSPRLLWYPVMHGD
KKSGDLLVAAELIMKDKPDGSNLPIVPPKRAAKLYMVPQGIRPVVQLTGIEVLTWGLRNM
KNFQLAAVSSPSLIVEFGGEIVQSAVIKNIRKNPNFPGSVLFFKVLLPKEEMYTPPIVIK
VIDHRPFGRKPIVGQCTIDSLEAFRCDPYTTRAEVAMSSKVALMAAPQDVAIDMEDRRPL
LETQVGENQLNTSKFYSSLGEHEKCGPYLQKGYDTLKIFHSELENVPEYKGLTDFCETFK
LYRGKSGEDDEDPSVVGEFKGLFKIYPLSDDPSVPAPPRQFRELPDSGPQECIVRIYIIR
AIDLQPKDSNGLCDPYIKISLGKKVVEDRDHYVPNTVNPVFGRMFELTCFIPQEKDLKIS
IYDFDLMSRDEKVGETVIDLENRLLSRFGSYCGLPQTYCISGVNQWRDQMKPSQILQNLS
RLRGIPPPVIAENGKTLSHAGREYTLDEFEANKEIHQHLGPPNERLALHVLRTQGLVPEH
VESRTLYSSFQPTISQGILQMWVDVFPKSLGLPGPPLDITPRKPKKFFLRVIIWNTTEVI
LDETSITGEEMSDIYVKGWMPGMEENKQKTDVHFRSLDGDGNFNWRFVFPFEYLPAEQLC
LVSRKEHFWSLDKSEFRTPAKLIIQIWDNDKFSLDDYLGTLDLDLNKLTPPAKTPKKCHL
EMVTDIKGPASHKSPHDTSLFTQKSVRGWWPCMSEVDGKRTLTGKVEMTLEILTEKEAEE
RPAGKGRDEPNMNPKLDPPNRPETSFFWFTNPCKTMKFIVWRRFKWVFIGIIILILVLLF
LGILFYSLPNYISMKIVKPFQ
NT seq
6186 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgggtggttgtggaatccgcaagcaaactccccaaaggcagctttggaacaccc
gatccaataaccactgttaatttcaaggatgaaaagaagaaaaccaaatcaattaatagt
aatttaaatcctgtttggaatgaggtccttgaatttgacctaaagggtttacctctggat
tcctcctcattcatcactgttacagtcaaagattttgaaaccatcggaaaagacaagttt
atcggttccacaacagtcttcctaaaggatttagcaagtggtcaagtgaagacccttcct
tccaagaatttggctctcctgaatgaaaagagtcaaccaactggaggaacaattgacctt
ataatcgcgtatgaaccaccgccatctactgcccttccaaatccaaatgacccgacagcc
aactctcaggattctggaggaacagctggagatggagatgaaggcgatgaagagtatggt
gatggcgggggagggggagggggagggggaggtgttccagcatcgccctctgctggacaa
cctgggaaccagctccagaaaaggcttgggagaagtaagaaaaaccgcagagtcctatcc
aacaaaccacaggatttccagatccgtattcgagtcattgagggtcggcaattacctgga
aacaacattaagcctgtagtcaaggttaatgtctgtggtcagacacacagaacaaggatt
cgaaaggggaacaaccccttttttgatgagattttcttctacaatgttaacatgttgcca
tcagatctctttgatgaatacataagcattagggtatatgattcatattctttgagagca
gacagcctcatgggggaattcaagctcgatgttgggtatgtctatgatgaacctggtcat
tccgttatgagaaagtggctgcttctcaatgacccggatgattccacatcgggagggaaa
ggatacctcaaagtcagcatgtttatcgttgggactggagatgagctgccggtggagaac
agggacacagatggagaccaggatgacattgagagcaatctactgctgcccgcaggggtc
tcgctacgatgggtcactttcatgctaaagctgtacagagctgaggatattccacagatg
gatgatgcgtttgtgcaaagtgtgaaggagatgtttggagctgagaataacaggaagaac
cttgtagatccgtttgtggaagtctgctttgcaggcaaaaaaatttgcagtaagataata
gagaagaatgcaaacccagattggaaccaagtcgtcaacctgcagatcaagtttccctcg
atgtgtgatagaataagactgactgtttttgactgggatcgactgacaagaaatgatgct
gttggaacaacatacttaaatatttccaaaatagcatcacctggtggggaacttgaagac
tcatcttcgggatatggggcttctccagcatctgaagctgaaaatacaggggagtcagat
gggggttttttgccagcctttggaccttgttatgtaaacctctatgggagtccgagagaa
tttactgggttccctgacccttatgatgatttaaactatgggaagggtgaaggggttgcc
taccgtggcagagtgctggttgaactcacaactaaactggatgcaaaagatgacaaaaag
attgatgacattcccaatgatgacatcttagtggtggagaaataccagcgcaggcgaaag
tacagcatgtctgctgtgtttcatacagctaatatgctgcaggatgtgggggacccaatt
cagtttgaagtcagcatcggaaactatggcaacatatttgatagcacttgcaagccactg
gcttccacaactcagtacagctgtgcagtgtttgatggtaacttctactactacttgcca
tggtccaacattaagccagttgttatactcacttcgtactgggaggacatcagtcacagg
atggatgctgtaaacattattgagaatatcacagaccgactgcaaaatcacatttctagt
ttgaaaacggccctgctggctaaagtttcagatacacgtctggcagagatatggttgaag
ctcgtcaatcaggtcatagaggatcttgacagtaaccctgtgccagaactggagggaaag
gccaaccttaccacccttgacattcagatcaggaagatgagggttaacgcactcaagtat
attaaagattccgccatccggatgagagaagaggccactgatgtgaagaccaccttgatg
gagattgaggactggctggagagaatgacggggctagttgatgagcctcaaaacagcatg
cctgacgtgatcatttggatgttgcgtggagagaagagagtggcctatgcacgcattcct
gctcatcggatcatgtactcaaccaccagtgaacaggcatgtggcaaatactgtgggaag
actcagaccatatttatgcagtatccaatggacaaaaccaaaggaatcaaactgccagtt
cagttacgagtcaatatgtggtttggactgtctgcccatgaaactaagtttaatagcttt
gcagaaggaaccttcagcgtgtttgcagaaatgtatgaaaaccaagcccttgtttttgga
aaatggggcaccacaggtcttgtgggacgccacaagacttctgacgtcaccgggaagatc
aagctgaaaagggaaagcttcatgcctccgaagggctgggaatgggagggagactggttt
gtggacccagagagaagtttgctgacagaagctgatgcgggtcatacagagtttacagat
gaggttttccagaatgagaccaggtatcctggaggggagtggaaaccagcagaggaaccc
tacacagatgtgaatggtgagaaggcacagggtcccagcgagattgagtgcccccctggc
tggaagtgggaggaagcctggagttttgacaccaacagagctgtggatgaacatggctgg
gagtatggcataaccatacctcctgatagcaagcccaaatcctgggtgccagcagaaaag
atgtaccacatccaccgacgaaagaggatggtacgaccacgcaagaaggagtcaaaggcc
agtacaccttcagagaaaatggccgctccactaggtgatgcagagagctgggaatacact
tcccttattggttggaagttccacaggaagcagcggacaacagacaccttccggcgcagg
cgctggaggaggaagatggctccgtcggaccgccttggtgcctctgccatcttcaaactt
gaaggagcactcggagctgacatttctgatgtagatgagaaaggcaaaagcaaggataca
gcaacttccatgtttggtgcaaacactcccacggtttcctgcaattttgacaggcctttt
gcttatcatcttcgagtctatgtttaccaggccagaaaccttttggctttggataaagat
agcttttcagatccgtatgctcatgtgtcgtttctgcatctgagtaaaaccacagagaca
attcctgccaccctaaatccaacctgggaccagaccctgatcttcaatactgttgagatc
tatggggaccctcaggcagtggcccagaacccacccaatgtggttttcgagctgtttgat
aaagatcaagtgggtaaagatgaacccctgggcagaagcgtgtgccctcctctggtaaaa
ctcaacccagaaacaggggtgagcccgaggctgctctggtatcccgttatgcatggagac
aagaaaagtggagatcttcttgtggctgctgagcttataatgaaggacaagcctgatggg
tcaaatctgcctatagtgcctccaaaaagagcagcaaaactctacatggtgccccagggt
atcagaccagtggtccagctcacaggcattgaggttctgacatggggtttgcgaaacatg
aaaaacttccaactagcagccgtttcttctccgagtctcattgtggagttcggtggggaa
attgttcagtcagcagtcatcaagaacattcggaagaatcccaactttccaggatcggtg
ctcttctttaaagtgcttcttccaaaagaagaaatgtacacccctcccatagtgattaaa
gtgattgaccaccggccatttggacggaaacccatcgtgggacagtgcaccatagactca
ctggaggcgttccgctgtgacccctacaccaccagagcggaggttgcaatgtcctcgaaa
gtggcccttatggctgcccctcaagatgtagccattgacatggaagatagaaggccatta
ctggagactcaggtaggtgaaaatcaactaaacacgagtaagttttactcctctcttggg
gaacatgagaagtgtgggccgtatctccagaaaggctatgacactttgaagatctttcat
agcgagttagagaacgttccggaatataaggggttaacagacttctgtgaaaccttcaag
ctgtacaggggaaaatcaggggaagatgatgaagacccttcagtggtgggagagtttaag
ggtttgttcaagatctaccccttgtccgatgaccctagtgtccctgcgccccctcgtcag
ttcagggagttgcctgacagcggaccccaagagtgcatcgtcagaatttacatcatcaga
gccattgacctgcagcccaaagacagcaatggcttgtgtgatccgtatataaaaatttct
ttgggtaagaaagttgtggaggacagagatcactatgtccctaacacagtgaacccagtg
tttggcagaatgtttgaacttacctgcttcatccctcaagagaaagacctaaagatttca
atttatgactttgacctgatgagccgtgatgagaaagtaggggagacggtgattgacctg
gaaaatcgtttactttcacgctttggttcatattgtggattaccgcagacctactgcatc
tcaggggtcaatcagtggcgtgatcaaatgaaaccatctcaaatactgcaaaatttgtcc
agactgagaggcatccctccaccggttattgcagagaatggcaaaacgctgtcccatgca
gggcgtgaatatacactggatgaatttgaggccaacaaagaaatccaccaacacctgggc
ccaccaaatgagcgcctggctctgcacgtcttgagaacacaggggctggttcctgagcat
gtggagtccaggactctctacagctcttttcagcccacaatctcacagggaattcttcaa
atgtgggttgacgtgttcccaaagagccttggtctccctggacctccattagacatcaca
cctcgcaaacctaaaaagttttttctgcgcgttattatttggaacacaacagaggtcatt
ctggatgaaaccagcatcacaggagaagaaatgagtgacatctatgttaaaggatggatg
ccaggcatggaagaaaataagcagaagacagatgttcacttcaggtcacttgatggggat
ggcaattttaactggaggtttgtgttcccatttgaatacctgccagccgaacaactgtgc
ctggtttccagaaaggaacatttctggagcctggacaaaagtgaattccggacacctgca
aagctgattattcaaatctgggacaatgataaattctctttggatgattacttaggtaca
cttgacctggatttgaacaaactaacgcctcctgccaaaaccccgaagaagtgccacttg
gaaatggtcactgacatcaagggacctgcctcacacaaatctccccatgatacctctctc
ttcacacaaaaatcagtgaggggctggtggccgtgtatgtcagaggtggatggaaaacga
accctaactggtaaagttgaaatgacactggagattctcactgagaaagaggctgaggaa
agacctgctgggaaagggagagatgaacccaacatgaatccaaagctggatcctccaaac
cgaccagaaacgtcctttttctggttcactaatccgtgcaagacgatgaagttcattgtg
tggcgcagatttaaatgggtctttattggcattatcattctaatactcgtgctacttttc
ctgggaatactcttctattcattaccgaactacatttcaatgaaaattgtgaaacccttt
cagtaa
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