KEGG   Polyodon spathula (Mississippi paddlefish): 121321847
Entry
121321847         CDS       T07273                                 
Name
(RefSeq) beta-TrCP isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04114  Oocyte meiosis
pspa04120  Ubiquitin mediated proteolysis
pspa04218  Cellular senescence
pspa04310  Wnt signaling pathway
pspa04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121321847
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    121321847
   04340 Hedgehog signaling pathway
    121321847
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    121321847
   04218 Cellular senescence
    121321847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pspa04121]
    121321847
   03036 Chromosome and associated proteins [BR:pspa03036]
    121321847
Ubiquitin system [BR:pspa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     121321847
Chromosome and associated proteins [BR:pspa03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     121321847
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_TEP1_C WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Gbeta Beta-TrCP_D WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 F-box-like WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_Aladin F-box Beta-prop_DCAF12 NBCH_WD40 Beta-prop_WDR11_2nd Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR19_1st F-box_5 DUF4508 DUF6188
Other DBs
NCBI-GeneID: 121321847
NCBI-ProteinID: XP_041117051
LinkDB
Position
10:complement(3344748..3371949)
AA seq 591 aa
MMEAEAVLQEKAFKFMCSVPRSLWLSCSSLADSMPSLRCLHTPGTGTLTAFQCSDEREDC
HNEEPPRKIIPEKNVYRQTKLANGTSSMIVPKQRKLSANYEKEKELCVKYFDQWSESDQV
EFVEQLISRMCHYQHGHINSYLKPMLQRDFITALPARGLDHIAENILSYLDAQSLCAAEL
VCKEWYRVTSDGMLWKKLIERMVRTDCLWRGLAERRGWGQYLFKKKPPDEKTPPNSFYRA
LYPKIIQDIETIESNWRCGKHSLQRIDCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDK
NTLECKRVLTGHTGSVLCLQYDERVIVTGSSDSTVRYWVYVIVTGSSDSTVRVWDVSTGE
MLNTLIHHCEAVLHLRFSNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF
DDKYIVSASGDRTIKVWNSGTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE
CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH
SGRVFRLQFDEFQIVSSSHDDTILMWDFLNDPDTQAESSRSPSRTYTYISR
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgatggaagcagaggcggtgttgcaagagaaggcttttaaatttatgtgctctgtgccc
aggtctctgtggttgagttgctctagcctggcggacagcatgccttcgctgcgatgcctg
cacaccccagggaccggcacactgaccgctttccagtgttctgatgagagagaagattgt
cataatgaggagccccctaggaagattatcccagagaagaatgtgtacagacagactaaa
cttgccaatggaacatccagcatgatcgtccccaagcagaggaagctgtctgccaactat
gagaaggagaaggagctctgtgtgaagtattttgaccagtggtcagagagtgaccaggtg
gagtttgtcgagcagcttatttcccggatgtgtcactaccagcacggacacatcaactct
tacttgaagcccatgttacagagggatttcatcactgcactaccagctcggggtctggat
cacattgcagagaatatcttgtcctacctggatgcccaatctctctgtgctgccgagttg
gtttgtaaagagtggtacagagtgacgtcagatggcatgctgtggaagaaactaatcgag
aggatggtcaggacagactgtctgtggagggggttggcagagagaagaggatggggccag
tatctgtttaaaaagaagcccccagatgagaagaccccacccaactcattctacagagca
ctttatcccaaaattatacaggacatagagacaatagagtcaaactggcgttgtggaaag
cacagcttacaacgaatcgactgcagaagtgaaaccagcaaaggggtatactgcctgcag
tatgacgatcagaagattgtgagtggtcttcgagacaacactataaagatttgggataag
aacacgttggaatgtaaacgagttcttacaggacacacgggttcagtgttgtgtctgcag
tacgatgagagagtcattgtcactggatcttcagactccactgtcaggtactgggtatat
gtcattgtcactggatcttcagactccactgtcagagtgtgggatgtgagcacaggcgag
atgttaaatacattaattcatcactgtgaggcggtgttgcatctgcgcttcagcaatggc
atgatggtgacctgttcaaaagaccgctcaattgcagtgtgggacatggcttcccccaca
gacattactctcaggagggtgctggtggggcatcgggcagcagtcaatgttgttgatttt
gatgataaatatatagtgtctgcctcgggagacagaactatcaaggtgtggaacagcggt
acatgtgagtttgttcggactctaaacggacataaacgtggtatcgcctgtttacagtac
agagacagacttgtagtgagtggatcctctgataacacgatcagattgtgggacattgag
tgtggagcttgcttacgagtactcgagggacatgaagagctggtacgatgtattcgcttt
gataacaagaggatagtcagtggggcttacgatggaaaaatcaaagtttgggatctggtt
gctgccttggacccccgagcgcctgcaggaacactgtgtctgcggactcttgtggagcat
tctggaagggtgttcagactgcagtttgacgagttccagatagtcagcagctctcatgat
gacacaatcctaatgtgggatttcttgaatgacccagacacacaggcagagtcctcgcgc
tccccctcccggacatacacctacatctcaagatga

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