Polyodon spathula (Mississippi paddlefish): 121321866
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Entry
121321866 CDS
T07273
Name
(RefSeq) rho guanine nucleotide exchange factor 38-like
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121321866
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121321866
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
BAR
SH3_2
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
121321866
NCBI-ProteinID:
XP_041117101
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Position
1:complement(70456302..70484751)
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AA seq
768 aa
AA seq
DB search
MEPKEPSDKEKEKGSKKKNIIFVKPRLYILERRKTDTVVADDCIGDVNSATLRRSQSDRT
EYNKKLKEKMTPHEISTPTSPTIDLEELKKRMMDKRSKVIHELVQTEKDYITDLQLCIKE
VVQPLRDIQVVDVDRLFTNIESVCEVSAKLLSKLEEAIAEADPERQIIGEAFIEIKSSLE
EAYKMYCYHHDDANSLLKSYEKDEEVKRHFRSCVLSLKKIYDREGKPNLLEMGSLMIKPV
QRVMKYPLLLSELWNSTPDCHPDNKPLEEALAAVKRINSNINEFKRRKDLVMKYRRNEEL
GTLMNKLNRLSFHSIIKRSIRVTGHLKILTGGESQVKDEKFDEEEKKFRNLEKAVRQLVK
NVYCYFQHTQEIIPLVVQNDEELQIILQETDKADSNAPPNNGGNPYIHFKEKLERMVLIP
LSTLQSMLPAPQKLIQKRYDKLLDYDSRLERSSPEELEMARRDYEALNAQLVEELQVFNP
AAKKILTNCIYCFVALLRDLMDSAARDSPSIQNLPAPLSNIHEVQNSVMEELSNLIFVKE
NTPKLIERKLSFDKPKKVVPEIPRQSEAQRSKLLSSHSPDKLYQLKRNCNATQEQDLSLF
EGELVAVVEQQDPFGSTSRWLVDTGSQQGYVYSSFLKQYNHTKEHNGTLHNQLEDFDNIS
LFISGNGSSSLKSFSIARSDSSSSINGIHEKAEFDGNNSFDESDNQQIFYAVYAFEARSE
QELSLQEYQHVRIVKFCDVSGNKDWWLAEANGQKGYVPANYLGKMSYA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaaggaacctagtgacaaagaaaaggaaaaaggatcaaaaaagaaaaatata
atatttgtgaaacctcggctgtacatcttagagaggaggaaaacggacacagttgttgct
gatgactgtataggagatgtcaactccgccaccctcagaagaagccagtctgacaggaca
gaatacaacaaaaaacttaaagagaaaatgacaccgcatgaaatttcaacaccaacctcc
ccgaccatcgatttggaagagctgaagaagaggatgatggacaagaggtctaaagttatc
catgaactggttcagacagagaaagattacatcactgatcttcagctctgtattaaggaa
gtggttcagccactgagagacatacaggttgtggatgtggaccgattgtttactaacatt
gaatctgtctgcgaggtgtcagctaaactgttgtccaaattagaagaggccatagcagaa
gcagatcctgagaggcaaataattggtgaagcattcatagagattaaatcttcactagag
gaagcctataaaatgtactgctatcaccatgatgatgccaacagtttattaaagtcctat
gaaaaagatgaagaagttaaaaggcatttcagaagctgtgttctgtccctgaaaaaaata
tatgacagggaaggaaagccgaatttgttagaaatgggatccctcatgattaaacctgtc
cagcgtgtgatgaagtacccactgcttttaagtgagctgtggaattctacacccgactgc
cacccagacaacaaacctttggaagaagccctagcagcagtgaaaagaatcaacagcaat
atcaatgaatttaaacgaagaaaagacctagtgatgaagtacaggagaaatgaggaattg
ggaactctgatgaacaagttaaacaggctgagttttcactccatcattaagagatcaatc
agagtcactggtcacctaaaaatcctgacaggaggggaatcccaggttaaagatgaaaaa
tttgacgaagaagaaaaaaaattcaggaatctagaaaaagctgtacggcaattagtgaaa
aatgtctattgttattttcaacacacacaggaaataatccctctagttgtccaaaatgat
gaggagcttcaaattattctacaggagacagacaaggctgatagcaatgctcctccaaac
aatggtggcaatccatacatacactttaaagagaagttggaaagaatggttctgatacct
ctgtctacattgcaatccatgttaccggcacctcagaagctcattcagaaacgctatgat
aaactgcttgactatgacagccgcctggagaggtcctcaccagaagagctggagatggca
cgcagagactatgaggctctcaacgctcagctagtagaggagctccaggtgtttaaccct
gcagctaagaaaatattaacaaactgtatttactgctttgttgctctccttcgggacttg
atggattctgcagctcgtgactctccatcaatacaaaatttgcctgcacctttgtctaac
atccatgaggtgcaaaacagtgtcatggaagaacttagtaacctgatctttgtgaaggag
aatactccaaagttaattgaacgaaaactaagttttgataaacctaaaaaagttgtgcct
gagattccacggcagtcagaagcccagcggtccaagctgttatcaagccactctccagac
aaactgtaccagctgaagcgcaactgcaacgccactcaggaacaggacttgagtctgttt
gagggggagctggtggctgtggtggaacagcaggacccctttgggagtacaagcagatgg
ctcgtcgacactggcagccagcagggttatgtttactcttcattcctaaagcaatacaac
catacaaaggaacataatgggacattacataaccaactggaggactttgacaacattagc
ctttttatctctggtaatgggagcagcagtttgaaaagcttcagcattgcccgcagtgac
agcagttcctctatcaatggaatacacgaaaaggctgagttcgacggaaacaattctttt
gatgaatcagacaaccagcagatcttctatgctgtctatgcatttgaagctcgaagtgag
caggagctaagcttacaggaataccagcacgtgaggatagtgaagttctgcgatgtgagt
ggcaacaaagactggtggctagctgaggccaatggtcagaaaggctatgtacctgccaac
tacctaggcaagatgtcatatgcataa
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