Polyodon spathula (Mississippi paddlefish): 121321915
Help
Entry
121321915 CDS
T07273
Name
(RefSeq) V-type proton ATPase subunit B, brain isoform-like
KO
K02147
V-type H+-transporting ATPase subunit B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00190
Oxidative phosphorylation
pspa01100
Metabolic pathways
pspa04142
Lysosome biogenesis
pspa04145
Phagocytosis
pspa04150
mTOR signaling pathway
Module
pspa_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
121321915
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121321915
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121321915
04142 Lysosome biogenesis
121321915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121321915
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121321915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
ATP-synt_VA_C
ATP-synt_ab_N
SH3_VIII-1_N
DUF3533
Motif
Other DBs
NCBI-GeneID:
121321915
NCBI-ProteinID:
XP_041117239
LinkDB
All DBs
Position
10:complement(20472983..20564674)
Genome browser
AA seq
504 aa
AA seq
DB search
MATVLGKRPMDNLNGPDAAARQHAQAVSRNYISQPRLTYSTVSGVNGPLVILDHVKFPKY
AEIVHLTLPDGTKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTACEFTGDILRSPVSEDML
GRVFNGSGKPIDRGPTVLAEDFLDIMGQPINPQCRIYPEEMIQTGISAIDGMNSIARGQK
IPIFSAAGLPHNEIAAQICRQAGLVKKSKDVMDYSADNFAIVFAAMGVNMETARFFKSDF
EENGSMDNVCLFLNLANDPTIERIITPRLALTTAEYLAYQCEKHVLVILTDMSSYAEALR
EVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDDITHPIPDL
TGYITEGQVYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSNQLYACYAI
GKDVQSMKAVVGEEALTSEDLLYLEFLQKFEKNFIAQGPYDNRTVYETLDIGWQLLRIFP
KEMLKRIPQSTVAEFYPRESSARH
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtgctgggtaaaagacctatggacaacctaaatggccctgatgctgcggct
agacaacatgcccaggcagtcagcaggaactatatttcgcagccaagactgacctactct
acagtgtctggtgtaaatggaccccttgttattttggaccacgtgaagttccccaagtat
gcagagattgttcacttgaccctgcctgatggcaccaagaggagcggacaagtgcttgaa
gtcagtggctccaaagccgtagtccaggtgtttgaggggacttcaggtatcgatgctaag
aaaacagcctgtgagtttacaggtgacatccttcgctcacctgtgtcagaggacatgctt
ggtcgagtattcaacggctctggtaaacctattgacagaggacccactgtgttggctgaa
gactttctggatatcatgggtcagcctatcaaccctcaatgccgtatctacccagaggag
atgattcagactggtatctctgctatcgacggcatgaacagtattgccagaggccagaag
atacccatcttctccgctgcaggtctcccacacaacgagattgctgcccagatttgccgt
caagcaggcctggttaagaagtcaaaagatgtcatggactacagtgctgataactttgcc
attgtgttcgctgctatgggtgttaatatggaaaccgctcgcttctttaaatccgatttt
gaggaaaatggctcaatggacaatgtgtgcttgttcttaaatcttgcaaatgaccccacc
attgagcgtattattacccctcgccttgcgctgactacagcggagtacctggcttaccaa
tgcgagaaacacgtcctggttattctcacagacatgagctcctatgctgaggctttaaga
gaggtttcggcagctcgtgaggaggtgcctggtcgcagagggttccctgggtacatgtac
actgacttggccacgatctacgaaagagccgggagagtagagggcagaaatggttcaatt
acacagatccccatccttaccatgcctaatgatgatattacccatcctatccctgacttg
actggctatatcaccgaaggacaagtttatgttgaccgacaacttcacaacagacagatt
tatcctcccattaacgttctgccctcgctgtctcggttgatgaaatccgctattggagag
gggatgactcgtaaagatcatgctgatgtgtccaaccagctgtatgcctgctatgctatt
ggcaaagacgtccaatcaatgaaggcagtggtgggtgaggaggctctcacttcagaggat
cttttgtacctggaatttctacagaagttcgaaaagaatttcatcgctcagggtccatat
gacaacagaactgtatacgaaaccttggatattgggtggcagctgcttcgaattttcccc
aaagagatgctgaagagaatcccacaaagcactgtggctgagttttacccaagggaatcg
tctgctcgccattaa
DBGET
integrated database retrieval system
