Polyodon spathula (Mississippi paddlefish): 121321923
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Entry
121321923 CDS
T07273
Name
(RefSeq) protein FAM160B1-like isoform X1
KO
K26421
FHF complex subunit HOOK interacting protein 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121321923
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121321923
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
121321923
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
FTS and Hook-interacting proteins (FHIP)
121321923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI16-like
DUF5917
KELAA
Microp_apicomplexa_7
Motif
Other DBs
NCBI-GeneID:
121321923
NCBI-ProteinID:
XP_041117249
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Position
10:complement(973093..985864)
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AA seq
785 aa
AA seq
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MFSKFTSILQHAVEALAPSLPLQEDFVYHWKAITHYYIETSDDKAPVTDTNIPSHLEQML
DILIQEENERESGETGPCMEYLLHHKILETLYTLGKADCPPGMKQQVLSFYTKLLGRIRQ
PLLPHINVHRPVQKLIRLCGEVLTAPTENEEIQFLCIVCAKLKQDPYLVNFFLEVKQDPV
LHSYRRQVISQAAETTLNKSKTGASGSSIPVRESVLGKLKEPSASCASDTGQTEVTGDPG
AATNKETELTQQAAEESVSVNTLNIPSQSETAANRPNQDYNLVNSLLNLTKSPDGRIVVK
ACEGLMLLVSLPEPAAAKCLTENTALCELLTERLTVFYKALPQSMDPLDIETIESVNWGL
DAYSGKEDRTAFPGKRALISFLSWLDYCDQLIKEAQKTAAVTLARYVRERFFVSVMEPQL
MQTSEIGILTSTALLNRLIRQVTSVALLQETVYFILGEQREPETLAGINSYPLRHRLIEH
CDHLSDEISIMTLRMFEHLLQKPSEHIIYNLVLRNLEERNYNEYKPPCQEDKDVVENGQI
AGAIDLEEDPLFTDLSPSNRLSADWLSASPPQTPDHTKSDGKTEVHKIVNSFLCLVPDEA
KSSYHVEGTGYDTYLRDAHRQFCEFCAFCTRWEWPGAPKTFENCHLEAAFFEGHFLKVLF
DRMGRILDQPYDVNLQVTSVLSKLSMFPHPHMHEYLLDPYINLAPGCRSLFSVIVRVVGD
LMLRIQRIPDFTPKLLQVRKRLLGLDPEDAVIDHSTLLEGVIVLEEFCKELAAIAFVKFH
ASTTP
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaaattcacctccatcctccagcacgcagtcgaggcgcttgctccttcactt
cccttgcaagaggattttgtgtatcactggaaggcaatcacacattactatatagaaaca
tcagatgataaagccccagtgacagacacaaacatcccctcccatctggagcagatgctc
gacatcctgatacaggaggagaatgagcgcgagtctggagagactgggccctgcatggag
tatttactgcatcacaagatcctggagaccctctacacgctgggcaaagctgattgtcct
cctggaatgaagcagcaggtgctgtcattctatacaaaactgctaggaagaatccgtcag
cccctgcttcctcatatcaatgtgcacaggccagttcagaaacttatccgtctttgtgga
gaggttctaacggctcctacggagaatgaagaaatccagtttctctgtatagtgtgtgca
aagctgaagcaagacccttacctggtcaacttcttcttagaggtgaagcaggatcctgtc
ctgcattcttacagaaggcaggtgatcagccaggctgcagaaactacattgaacaagtca
aagacaggtgcaagcgggtcctccatccctgttagagaaagcgtattgggaaaactcaaa
gaacccagcgcttcctgcgcttctgatactgggcagactgaggtcactggagaccctgga
gcagctaccaacaaagaaactgagttgacgcaacaggctgccgaggagtctgtctcagtg
aacacgttgaatataccgtcgcagagcgagactgctgcaaatcgtcccaaccaggactac
aatctagtcaattctttgcttaatctaacaaagagccctgatggacggattgtagtgaaa
gcctgtgaaggtcttatgctgttagttagtttgcctgagccagcagctgccaagtgcctg
acagagaacactgccctgtgtgagcttcttacagagaggctgactgtgttctacaaagca
ctgccgcagtcaatggatccactggatatagagaccatcgagtcagttaactggggtttg
gatgcatacagcggcaaagaagacaggacagcattcccaggaaagcgagccctcatctct
ttcctgtcttggttggattactgtgatcagcttatcaaagaagcacagaagactgctgct
gtaacacttgcaagatacgtgcgggagaggttctttgtttctgtcatggagccacagtta
atgcagacgtctgaaattggaattctgacctcgacagctctgctaaaccgtctcattcgc
caggtcacgtctgtagctttgctgcaggagacggtttactttattttgggggaacagaga
gagcctgaaacactggcaggcattaatagttatcctctgaggcaccgactcatagagcat
tgtgatcatctttcagatgagatcagtataatgaccctaagaatgtttgagcacctctta
caaaaacccagtgagcacatcatttacaacctggtcctcaggaacttggaggagagaaac
tacaacgaatacaaacctccttgtcaagaagacaaagatgtggtggaaaacggacaaata
gctggagccatagacctagaggaagatcctctttttacagacctttcacctagcaacaga
ttatcggctgattggctgagtgcatccccgcctcaaactccagaccacacaaaatccgat
ggcaagacagaggttcataaaattgtaaatagcttcctttgtttagtccccgatgaagca
aaatcttcatatcatgtggaaggcacaggttatgatacctacctcagagatgcacataga
cagttctgtgaattctgtgctttctgtacgaggtgggagtggccaggagcaccgaagacg
tttgaaaattgtcatttggaagctgctttctttgaggggcatttccttaaagttcttttt
gaccggatgggtaggattcttgatcagccttatgatgtgaatttacaagtgacttcagtg
ttgtcgaaattgtccatgtttccccaccctcacatgcacgaatacttattagatccttac
atcaacttagctccaggctgtcggtctctcttctctgtgattgtcagggtggttggagac
cttatgttaagaatccagcgcatcccagattttacccctaaacttctgcaggtcagaaag
cgattgctgggactggaccctgaagatgcagtcattgaccacagtaccttgttggagggt
gtgattgtcctggaggagttttgtaaggagttggcagcaatagcatttgttaaatttcat
gcatcaacaacgccatag
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