Polyodon spathula (Mississippi paddlefish): 121321993
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Entry
121321993 CDS
T07273
Name
(RefSeq) nucleolysin TIAR isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121321993
03041 Spliceosome [BR:
pspa03041
]
121321993
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121321993
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121321993
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Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_Nup35
Nup35_RRM_2
Calcipressin
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
121321993
NCBI-ProteinID:
XP_041117324
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Position
10:complement(22859373..22926073)
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AA seq
453 aa
AA seq
DB search
MAMRMCRPGFPGSPVSAIFCLLPEKEIRWSQFVQHQSTQGLHSNNRPVYQNMDDDSYPKT
LYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNATVGFSVLQQTSNDPYCFV
EFYEHRDAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDI
KAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWA
TRKPPAPKNVQENSSKQLRFEDVVNQSSPQNCTVYCGGIQSGLTEQLMRQTFSPFGQIME
IRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIEGHVVKCYWGKESPDMTKNFPQMEYGQW
GQWSQMYGNPQQYGQYMANGWQMQSYGMYGQAWNQQGFGVEDSLLAAAAQNISRQSQSPA
WVGGFGAQPAQGQGAPAVMPNQAGFGMAGYQTQ
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgcgcatgtgcaggcctgggtttcctggctcgccggtttccgccattttctgc
cttttaccagagaaagaaattcgctggagtcagtttgtacagcaccaaagtacgcagggg
ttgcacagtaataacaggccggtataccagaacatggatgacgacagctaccccaagacc
ctctatgtaggtaacctgtccagagacgtgacagaagtcttaattcttcagttgtttagt
cagattggaccatgcaagagctgtaaaatgattacagagcaaccagatagcagaagggtc
aacgctactgttggattttctgttttgcagcaaacaagcaatgatccctattgctttgtg
gagttctacgaacacagggatgctgctgctgcactggcggcaatgaatggcaggaagata
atgggaaaggaggtcaaggtaaattgggcaacaactccaagtagccagaagaaagacacg
tccaatcacttccatgtctttgtgggagatttgagcccggagataactacagaagatatc
aaagctgcttttgctccttttggtaaaatctcggatgctcgtgttgtgaaggacatgaca
acagggaaatcaaagggctatggatttgtgtctttctacaacaaactggatgcagaaaat
gcaattgtacacatgggtggacagtggttgggaggtcgacagattcggactaactgggct
actcgtaagccacctgcaccaaagaatgtccaagaaaacagctctaagcaattgagattt
gaagatgttgtgaatcagtcgagcccccagaattgcactgtctactgtggaggcattcag
tcaggattaacagagcaactaatgcgtcagactttctcaccatttggacaaataatggaa
atccgagttttccctgaaaaagggtattcatttatcaggttttcttcacatgaaagtgca
gctcatgccattgtttcagttaacgggactagcattgaaggccacgttgtgaagtgttat
tggggtaaagaatcacccgacatgacaaaaaactttccacagatggagtatggccagtgg
gggcagtggagtcagatgtatggaaacccacagcagtatggacagtacatggctaatggc
tggcagatgcaatcgtatggcatgtatggccaggcatggaatcaacaaggttttggtgtt
gaggattcgctgttggcggcggcagcacagaacatatcaaggcagtctcaatccccagcc
tgggtgggaggttttggtgctcagccggcgcaaggacagggggctcctgctgtaatgcca
aaccaagcgggctttgggatggcaggttatcagacacagtga
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