Polyodon spathula (Mississippi paddlefish): 121322014
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Entry
121322014 CDS
T07273
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121322014 (dhx32b)
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121322014 (dhx32b)
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121322014 (dhx32b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
AAA_19
nSTAND3
Motif
Other DBs
NCBI-GeneID:
121322014
NCBI-ProteinID:
XP_041117378
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All DBs
Position
10:5803653..5814007
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AA seq
744 aa
AA seq
DB search
MAENSAVSEEPYLSDGFDSEVVGEDGALDFGEELELNQFDGLPYSSRYYTLLKERKSLAV
WEAKRQFMDSLAKNQFVIVSGAAKTGKSSQIPQWCAEHCLSVHYQHGMVVCTQVHKQKAV
GLTLRVADEMDVNIGHEVGYVVPLESCCTSDTVLRYCTDDLLLREMMSDPLLEHYGVIVI
DQAHERTVSTDVLLGLLKDIVLQRPELRVVVITAPHMCSKLQAYYGNAPLIRVDSKCQTE
VVYSNSNHKDHFYAAVRLVFEMHHTKEDGDIVLFLASSQEIDSAHDIIRQEAVNLSPDLG
ILVPVSLIPGKGGFLSRHSEEQERSSKPYVRRVFLTTSKGEDLPWAINNVNFIIDVGIEK
RNVYNPRIRANSLVVRPISKSQAEIRRQLVGTTGKCFCLYPEEMQLPDQTPPQILESNFT
AMVVFLKRMDIAGLGHCEFLDRPDPEGLMQSLEELDYLAALDDDGNLSEIGIIMSEFPLD
PQMAKTLLASCEFDCVNEMLTIAAMLTAPNCFLEPPLGSEQLALTCHMKFQHSEGDHFTL
INVYNAYNQSRHFNLEKWCQDYFLSHTALQTADAIRSELRDIIKRIELPISEPSFGTKSN
TLNIKRALLSGYFMQIARDLDGSGNYFMLTNKHVAQLHPFSVYGSKAEKLGLPEWVLFHE
YTPSENNCVQTVTEISPEMFIEMAPQYFFYNLPHSESKEMLQLIIDHISSAQCKKEEQQN
IQTLTHKTPEECQTLQASERCVIQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaactccgctgtatcggaagaaccgtatttatctgatggatttgattcagaa
gtagtcggagaggatggggctttagatttcggcgaggaattagaactgaaccaattcgat
gggttgccttattcctcccggtattacacgctactcaaggaaaggaagagcctcgcagtt
tgggaggccaagcgtcaattcatggacagtttggccaagaatcagtttgtgatcgtctct
ggggcagcaaaaactggcaaaagctctcagatccctcagtggtgtgcggagcactgcctg
tctgttcactaccagcatggcatggtggtgtgcacccaggtgcacaagcagaaggcagtg
ggcctcacactccgtgtggcagacgagatggatgtcaacattggacacgaagtgggttat
gtcgtcccactggaaagctgctgcaccagcgacaccgtcctgaggtactgtactgatgat
ctgctgctccgagaaatgatgtctgaccctctcttggagcactatggtgtcattgtcatt
gaccaagctcacgaaaggacagtctccactgatgtgctactagggctgttgaaagacatt
gtgctccagaggcctgagctcagagttgttgtaatcactgctccccacatgtgcagcaaa
ctacaggcttattatggaaacgctcctcttataagggtggacagtaagtgccaaacagag
gtggtttacagcaatagcaaccacaaggaccatttctatgctgcagtgagactggtgttt
gaaatgcatcacacaaaggaggacggggacattgttctgtttttggcttctagccaggag
attgacagtgctcatgatatcatcaggcaagaggctgttaatctgagcccagatcttgga
atactagtcccggtttccttgatcccagggaaaggtggatttttgtccagacacagcgag
gagcaggagagaagcagcaaaccgtacgttagaagagtcttcctgactaccagcaagggg
gaggacttgccttgggcaatcaacaatgtgaacttcattattgacgtgggcattgagaag
agaaatgtttacaatcccaggatcagagccaactcccttgtagtgcgaccaatcagtaaa
agccaggctgagatacggcggcagcttgtgggtacaacagggaagtgtttctgcctgtac
ccggaagagatgcagttacctgatcagactcctcctcagattctggaatcaaacttcaca
gccatggtggtgtttctaaaaaggatggacattgctggcctgggccattgcgagttcttg
gacagaccagatccggaaggtctaatgcagtctctggaagagctggattacctggctgcc
ctggatgatgatggaaacctatctgaaattggaatcatcatgtcggaattcccacttgat
ccccagatggcaaagactctgctggcctcctgtgaatttgattgtgtgaacgaaatgctt
accatagcagcgatgctgacagctccaaactgcttcctggagcctcctcttggctcagaa
cagctggccctcacttgccacatgaagttccagcactctgaaggggatcactttactctc
attaatgtctacaatgcctataaccaaagtcgacacttcaaccttgagaaatggtgccaa
gattattttctcagccatactgctctccagacagctgatgccatcagatctgagctgaga
gatatcattaaacgtattgaacttcccatctctgagccttcctttggaacaaaaagcaac
actttgaacataaagagagcgctgctgtctgggtacttcatgcagattgctagagattta
gatggttctgggaactacttcatgttaacaaacaagcacgtagcccagctgcatcctttc
tcagtatatggctccaaggcagagaaactgggacttccagagtgggttctgttccatgaa
tacacaccctcggaaaacaactgtgttcaaacagtcacagaaatatcacccgagatgttt
atcgagatggctccacagtacttcttctataaccttccccatagtgaaagcaaagagatg
ctgcagcttatcattgaccacatttcttcagcacagtgcaaaaaagaggagcaacagaac
attcaaacactcactcataaaaccccagaggaatgtcaaacactccaggcttccgaaaga
tgtgttattcagtaa
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