Polyodon spathula (Mississippi paddlefish): 121322026
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Entry
121322026 CDS
T07273
Name
(RefSeq) sphingomyelin synthase-related protein 1-like isoform X1
KO
K22697
phosphatidylethanolamine phospholipase C [EC:
3.1.4.62
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
121322026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121322026
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.62 phosphatidylethanolamine phospholipase C
121322026
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121322026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP2_C
SAM_1
SAM_2
SAM_PNT
SAM_3
PAP2
Motif
Other DBs
NCBI-GeneID:
121322026
NCBI-ProteinID:
XP_041117394
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Position
10:10513081..10523849
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AA seq
427 aa
AA seq
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MGERFRKECKTMVVSQPSIRHWTTKHVAKWLKEEGFSDYVDLLCNRHRLDGTSILTLTEY
DLRSPPLELKVLGDIKRLMVSIRKLQKQNSDVLEELGYTCEGWLSGSGGHSPNSIQGCVG
SDWLYNGDPARDPDESVASLSTDQYSNGKYKQHTRRLDPEYWKTILSSVYVVFVFGFTSF
VMVIVHERVPDMQTYPPLPDIFLDSVPRIPWAFAMAEACGVILCNIWLLVLLLHKHRSIL
LRRLCSLMGTVFMLRCITMFVTSLSVPGQHLQCSGKLNSDMWAKLKRAVAIWSGFGMTLT
GVHTCGDYMFSGHTVVLTMLNFFVTEYTPRSWNFIHTLSWVLNLFGIFFILAAHEHYSID
VFIAFYITTRLFLYYHTLANTRAYQQSRRARIWFPMFSFFECNVNGPVPNEYCWPFSKPS
ILKRLIG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaacggtttcgcaaagaatgtaaaacaatggtggtgagccagcccagcatccgc
cactggaccaccaagcacgtggcaaagtggctgaaggaagaaggattcagtgactatgtg
gaccttctgtgcaacaggcaccggctggacgggacgtccatcctgactttgacagagtat
gaccttcgttcccctcccttggagttgaaagtactgggagacatcaagaggcttatggta
tccattcgcaaacttcagaaacagaacagcgatgttttagaagagctgggctacacttgc
gaagggtggctgtctggctcagggggacacagcccgaactctatacagggctgtgtaggt
agcgactggctgtataacggggacccagccagagacccggatgaatcagttgccagccta
agcaccgaccagtattctaatgggaaatataaacagcatacgcggagactggacccagag
tattggaagaccattttaagttctgtttatgttgtctttgtgtttgggtttacatccttt
gtcatggttatagtccatgagcgggtgcctgacatgcaaacctacccccctttgccagac
atattcttagacagtgttccaaggataccatgggcctttgctatggctgaagcctgtggt
gtgatcctgtgcaacatttggttgttggtgttgcttcttcacaagcacagatctattctt
ctacgccgattgtgcagtctgatgggcacagtcttcatgctgcgttgcattacaatgttt
gtgacttccctctcggtgcctggccaacatttgcagtgttctggaaagctaaacagcgac
atgtgggcaaaactgaagcgtgcggtggccatttggagcggttttggaatgacgttgacg
ggagtccatacctgtggagattacatgtttagtggtcacacagtagtcctgactatgctg
aacttctttgtaacagagtatactccaagaagctggaactttatacacaccttgtcttgg
gttctgaatctgtttggcattttctttatactagcagcccatgaacactactcaatagat
gtcttcattgctttttatatcaccacaagactgtttttgtactaccacacactagcgaac
accagagcctatcagcagagccgccgagccaggatctggttccccatgttctcctttttt
gagtgcaatgttaacggaccagtgcccaatgaatactgctggccgttctctaaaccttcc
atactgaaaaggttaatcggctag
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