Polyodon spathula (Mississippi paddlefish): 121322038
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Entry
121322038 CDS
T07273
Name
(RefSeq) double-stranded RNA-specific editase 1-like isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121322038
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121322038
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Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
121322038
NCBI-ProteinID:
XP_041117418
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All DBs
Position
10:27004213..27185358
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AA seq
691 aa
AA seq
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MAEGLCSTDVKENRNLDNVSSKEALGEGVQLPNGGSGSRKRPLEEGNNGHSHSKFRAKKR
KKTPGPILPKNALMQLNEIKPGLQYKLLSQTGPVHAPVFVMTVEVNGQLFEGSGPTKKKA
KLNAAEKALRSFVQFPNASEAHMAMGRTLTVNTDFTSDQADFPDTLFNGFETPAQADVAY
YLGSNGNGSFNSIGDYPLPSSGGVDNLSQSPLPAPSALAPSSGKNSVMILNELRPGLKYD
FVSESGESHAKNFVMSVTVDGQAFEGSGRNKKLAKARAAQAALSSLFNMQLDQTPSRQPI
PREGLQLHLPQVLADSVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDVKDAEVIC
VSTGTKCINGEYMSDRGLALNDCHAEIIARRSLIRYLYTQLEYFLSSNKEDQQKSIFLQC
ERGGYKLKDNVQFHLYISTSPCGDARIFSPHEAGMEDQGDRHPNRKARGQLRTKIESGEG
TIPVRSNNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMNYFTEPIYFSSIILGS
LYHADHLSRAMYQRIADIEDLPQSFTLNKPLLSGISNAEARQPGKAPNFSVNWTVGDQAL
EVINATTGKDDMGRASRLCKHVLYSRWIRLQSKLLSTLRIKLSKPSSYYEVKQAATEYHS
AKQALIKAFHKAGLGAWVKKPIEQDQFSQSP
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggtttgtgcagcaccgatgttaaggaaaatcgcaacctggacaacgtctct
tcaaaggaagctttgggtgaaggggtccaactccccaatggaggcagtggcagcaggaag
cgcccactcgaggagggtaataacggccactcgcattccaagttccgggccaagaaacga
aagaaaaccccggggcccatcttgccaaagaatgccctaatgcagctcaatgagatcaag
ccagggctgcagtacaagctgctgtctcagactgggccggtccacgctcctgtgttcgtc
atgacagtggaggtcaacgggcagcttttcgaaggctctggtcccaccaagaagaaggcc
aagcttaatgctgcagagaaggccctgaggtcttttgtccagtttcccaacgcttcagag
gcccacatggccatgggtcggaccctgactgtaaacaccgacttcacttccgaccaggca
gacttccctgacaccctctttaatggttttgagaccccagctcaggctgatgtggcctat
tacctgggctccaatggaaatggctcatttaactccataggggattatcctcttccctct
tcaggaggggtagacaatctcagccagtcccctttgcctgccccatctgcccttgccccc
tctagcgggaagaactctgtcatgatcctgaacgagctacgcccaggcctaaagtatgac
tttgtatccgagagcggagaaagtcacgccaaaaactttgtgatgtcagtaacagtggac
ggacaggcctttgaaggttcggggaggaataagaagttggctaaggcccgtgccgcccag
gcagccctctccagcttgtttaacatgcagcttgaccagacaccatcccgacagcccatc
cccagggaaggcttacagcttcatcttccccaggttctagccgactctgtttcccgtctt
gttgtggataaattcagtgaactgaccgacaatttcacatcacctcatgcacgtaggaaa
gtcttggctggggttgtcatgacaacaggcactgacgtgaaagatgccgaggtgatttgt
gtctccacggggaccaagtgtataaacggggagtatatgagtgaccgcggcctagccctc
aacgactgccacgctgaaattatcgcccgaaggtccctaatacgatacctctatacccag
cttgaatacttcttgagcagcaacaaagaagatcaacagaaatcaattttcctccagtgt
gagagaggtggctataaactgaaggacaatgtccagtttcacctatacataagcacttca
ccatgcggagacgccaggatattctccccacatgaagctggaatggaggaccaaggagac
aggcacccgaaccggaaagctcgaggacaacttcggacgaagattgagtctggcgagggg
acaatcccagtacggtccaataacaccatccagacatgggacggggtactgcaaggagag
agactgctcacaatgtcgtgcagtgacaagattgccaggtggaatgtggttggaatccaa
ggatccttaatgaactacttcacagagcccatttacttctccagtatcatccttggaagt
ttataccacgcagaccacctctcccgggccatgtaccagagaatagctgacattgaggac
ctgccccagtcattcacactcaataaacctctgctcagtggtattagcaacgcagaagcc
cgacaaccaggcaaggctcccaatttcagtgtgaactggacagtgggagaccaggccctt
gaggtcattaacgccacaacaggaaaggatgacatgggccgtgcatcccgtctctgcaag
catgttctgtacagccgctggatacgcctgcagtcaaagcttctctcaactctgcggatc
aaactgtccaagcccagctcgtactacgaagtcaagcaggctgccacagaataccattca
gccaagcaggcactcattaaggcttttcataaggctgggctgggtgcctgggtgaaaaag
ccaatagaacaggaccagttctctcagagcccatga
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