Polyodon spathula (Mississippi paddlefish): 121322073
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Entry
121322073 CDS
T07273
Name
(RefSeq) RPE-retinal G protein-coupled receptor-like
KO
K04254
retinal G protein coupled receptor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121322073
04030 G protein-coupled receptors [BR:
pspa04030
]
121322073
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121322073
G protein-coupled receptors [BR:
pspa04030
]
Rhodopsin family
Vision
Opsin
121322073
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srsx
7TM_GPCR_Srt
ECF_trnsprt
Motif
Other DBs
NCBI-GeneID:
121322073
NCBI-ProteinID:
XP_041117510
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All DBs
Position
10:12788109..12796533
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AA seq
295 aa
AA seq
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MVTSSSLPEGFTDMDVFGLGTALLVEGLLGFLLNGLAILSFFKVKEMRTPSNFLVLSLAA
ADIGVSMNAFVAAFSSFLRYWPYGSEGCQTHGFQGFVTALASISSCAAIAWDRYHQYCTR
TKLQWSTAITVAVVVWGFSAFWSAMPLLGWGEYDYEPLRTCCTLDYTKGDRNFISFLLPM
AFFNFVIPVFIMYTSHQSVAQKFKKTGQKKFNTGLPLKSLVICWGPYSLLCLYAAVEDAT
LISPKLRMIPAILAKTSPAINALIYSFGNENYRGGIWQFLTGQKMEPVQTENKTK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggttacctcttcatcgttaccggagggtttcactgatatggatgtgttcggactgggg
actgctcttcttgtggagggtctccttggcttcttactcaatgggctggcgatactttct
ttttttaaagtaaaggaaatgagaactcccagtaattttctcgttctcagtctggctgct
gccgacattggggtttccatgaacgcttttgttgcagcgttctccagctttttgaggtac
tggccatatggttcagaaggttgccagactcatggttttcaagggtttgtgacagctcta
gccagcatcagctcctgtgcagccattgcctgggacagataccaccagtactgcaccaga
acaaaattgcagtggagtactgccataactgttgcagttgtggtgtggggattttctgca
ttctggtctgccatgcctctgctgggatggggagaatatgactatgaacctctgaggacc
tgttgcacactggactacaccaagggagacagaaatttcatctccttcttgcttccaatg
gcatttttcaactttgtgattccagttttcatcatgtacacttcccatcaatcagtggcg
cagaagttcaagaaaactggacagaaaaaatttaatactggacttcctctgaagtcactt
gttatttgctggggcccctattctcttctatgtctgtatgccgctgttgaagatgccacg
cttatatctcctaaattgagaatgatccctgctatcctggccaagacttcaccagcaata
aatgctttaatatattcattcggaaacgagaactacagaggtggaatctggcaattcctg
actggacagaagatggaaccagttcagactgagaacaagacaaaataa
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