Polyodon spathula (Mississippi paddlefish): 121322189
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Entry
121322189 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: nck-associated protein 1-like
KO
K05750
NCK-associated protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04810
Regulation of actin cytoskeleton
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121322189
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121322189
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Gene cluster
GFIT
Motif
Pfam:
Nckap1
Motif
Other DBs
NCBI-GeneID:
121322189
NCBI-ProteinID:
XP_041117714
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All DBs
Position
10:35040524..35095081
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AA seq
1130 aa
AA seq
DB search
MSRGVLQPSQQKLAEKLTILNDRGIGMLTRIYNIKKQGQVWKACGDPKAKPSYLIDKNLE
SAVKFIVRKFPAVETRNNNQQLAQLQKEKSEILKNLALYYFTFVDVMEFKDHVSELLNTI
DACQVFFDITVNFDLTKNYLDLIVAYTTLMMLLSRIEERKAIIGLYNYAHEMTHGSSDRE
YPRLGQMIVDYENPLKKMMEEFVPHNKALSDALLSLQMVYPRRNLSADQWRNAQLLSLIS
APSTMLNPAQSDTMPCEYLSLDAMEKWIVFGFILCHGVLNTDAAALSLWKLALQSSSCLC
LYRDEVYHIHKSAEDLFVNIRGYNKRITDIRECKEAALAHAGSMHRERRKFLRSALKELA
TVLADQPGLLGPKALFVFMALSFARDEIIWLLRHADNIQKKSADDFIDKHIAELIFYMEE
LRAHVRKYGPVMQRYYVQYLSGFDAVVLNELVQNLSVCPEDESIIMSSFVNTMTSLGVKQ
VEDGEVFDFRGMRLDWFRLQAYTSVSKASLGLADHRELGKMMNTIIFHTKMVDSLVEMLV
ETSDLSIFCFYSRAFEKMFQQCLELPSQSRYSISFPLVCTHFMSCTHELCPEERHHIGDR
SLSLCNMFLDEMAKQARNLITDICTEQCTLSDQLLPKHCAKTISQAVNKKSKKQTGKKGE
PEREKPGVESMRKNRLLVTNLDKLHTALSELCFSINYVPNMVVWEHTFTPREYLTSHLEI
RFTKXVTLSYVVARSYEYLDNWTSVRAYMTVLQSIENYVQIDITRVFNNVLLQQTQHLDS
HGEPTITSLYTNWYLETLLRQVSNGHIAYFPAMKAFVNLPTENELTFNAEEYSDISEMRA
LSELLGPYGMKFLSESLMWHISSQVAELKKLVVDNVEVLTQMRTSFDKPDQMAALFKKLS
SVDSVLKRMTIIGVILSFRSLAQEALRDVLSCHIPFLVSSIQDFKDHIPRETDMKVAMNV
YELSSAAGLPCEIDPALVVALSSQKSENISPEEEYKIACLLMVFVAVSMPTLASNVMSQY
SPAIEGHCNNIHCLAKAINQIAAALFTIHKGSIEDRLKEFLALASSSLLKIGQETDKTTT
RNRESVYLLLDMIVQESPFLTMDLLESCFPYVLLRNAYHAVYKQSVTSSA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggagttctgcagcctagccagcaaaagctggcggagaaactgaccatcctg
aacgacaggggcattgggatgcttacccgcatctacaacatcaaaaagcaaggacaagtt
tggaaggcatgtggagaccccaaagcaaagccgtcataccttatagacaaaaaccttgag
tctgctgtcaagttcattgtcagaaaattcccagctgtggaaacacgcaacaacaatcaa
cagcttgcacaactacaaaaagaaaagtctgaaattctaaagaaccttgctttatattac
ttcacctttgttgatgtcatggaatttaaggaccatgtttctgaactgttgaacactatt
gatgcttgccaagtcttctttgacattacagtcaattttgatcttaccaagaactaccta
gatttaattgtagcctacactacactgatgatgctgctgtctcggattgaagaacgaaaa
gcaatcattggactgtacaattatgctcatgaaatgacacatgggtcaagtgaccgagag
tatcccaggcttggacagatgattgttgactatgaaaatcctttgaagaagatgatggaa
gaatttgtgccacataacaaggccttgtccgatgcattgctttcacttcagatggtgtat
ccgcggcgaaatctatcggctgatcagtggcgcaatgcccagttactcagtcttataagc
gctccgagcacaatgcttaaccctgctcaatcagacactatgccatgcgaatatctttct
ttggatgctatggagaagtggatcgtttttgggttcattttgtgtcatggagtcctgaac
acagatgcagccgcacttagtctgtggaagcttgcccttcaaagcagctcttgtctctgc
ctctatagagatgaagtctaccatattcacaaatctgcagaagacttatttgtgaacatt
agagggtacaacaaacgtattactgacattagagaatgcaaagaggctgcattagcacat
gctggatccatgcacagagaaaggcgcaagtttttaaggtctgcgctgaaagaactagcc
acagttcttgctgaccaacctggattattgggcccaaaggcactttttgtatttatggct
ctttcctttgcccgagatgaaattatttggcttcttcgccatgctgataacatccagaag
aaaagtgcagatgattttatagataagcatattgctgaattgatattttacatggaagaa
ctgagagcacatgtgcggaaatatggaccagtaatgcagagatactacgtgcagtactta
tctggatttgatgctgttgtattgaatgaacttgttcagaatctgtctgtctgccctgaa
gacgaatcaatcatcatgtcttcatttgtgaacacaatgacttctctcggtgtaaaacaa
gttgaagatggggaggtgtttgatttcagaggcatgaggcttgactggttcagattgcag
gcttacaccagtgtatccaaggcttcattgggtttggcagatcatagagaacttggcaag
atgatgaacactattatttttcatactaaaatggtggactccttggttgaaatgttggtg
gaaacatctgatctctccatattctgcttttacagtcgtgcttttgagaagatgttccag
cagtgcttggagctgccttcacagtccagatactccatttctttcccactggtctgcacc
catttcatgagttgtacccacgagctgtgccctgaagagcgacatcatattggagatcgg
agtctctctttgtgtaacatgtttttggatgaaatggcaaaacaagctcgaaatctcatt
acagacatctgcacagaacaatgcactcttagtgaccagttactgccaaaacattgcgcc
aaaaccatcagtcaagcagtgaacaagaagtcaaaaaaacagactggaaagaaaggagaa
cctgagcgagagaagcctggagtggagagcatgagaaagaataggcttctagttaccaac
ttggacaaactacacactgctctttctgagctttgtttctccatcaattatgtaccaaat
atggttgtttgggagcacaccttcactccaagagaatatttgacttcacatctggaaatc
cgcttcaccaagtaagtcacactcagttatgtagttgcacgctcctatgagtatctcgac
aactggacaagtgtaagggcgtatatgacagtactacagtccattgaaaactatgtacaa
attgacattacaagagtgttcaacaacgtcctcctacagcaaacccagcatttggatagt
catggagagcctacaataaccagcctgtacaccaactggtatctggaaactttactgagg
caagtgagcaatgggcacattgcatacttcccagcaatgaaggcctttgtgaatctgcct
acagaaaatgagctaacttttaatgcagaggaatattcagacatttcagagatgagggct
ctttctgagctgctgggtccctatggtatgaagttcctcagtgaaagcctgatgtggcac
atttcttcccaggtggctgaactcaagaaacttgtggtggataatgttgaagtgcttacg
caaatgaggaccagctttgacaaaccagaccagatggcagcactgttcaagaaattatca
tcagttgacagtgtactgaaaaggatgaccattattggtgtaattctctcattccgctcg
ctagcccaggaagcacttcgagacgtgttgtcctgtcacattcccttccttgtaagctca
attcaggacttcaaggaccacataccaagggaaacagacatgaaggtggcaatgaacgtc
tatgagctttcatcagctgcaggcttgccctgtgagattgacccagccctagttgtggca
ttatcttcccagaagtctgagaatatcagtccagaagaagaatacaaaatagcctgtctc
ttgatggtttttgtggcagtttcaatgccaaccctggccagcaatgtgatgtcacaatac
agccctgccattgaaggacactgcaacaacattcactgcttggcaaaggcaataaaccag
atagctgctgcattgtttaccatccataaaggcagcattgaggaccgtctcaaagagttt
ctggctctcgcatcttccagcttgctgaaaatcggacaggagacagataagacaacgaca
cggaacagggaatcggtttatttgctgctcgatatgattgtgcaagagtctccttttctt
acaatggacctgttggagtcctgcttcccctacgtcctgctgaggaatgcataccatgcc
gtctacaagcaaagtgtcacatcttcagcataa
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