Polyodon spathula (Mississippi paddlefish): 121322199
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Entry
121322199 CDS
T07273
Name
(RefSeq) homeobox protein Hox-D3a-like isoform X1
KO
K09303
homeobox protein HoxA/B/D3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121322199
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121322199
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4074
Homeodomain
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
121322199
NCBI-ProteinID:
XP_041117735
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Position
10:complement(35908301..35912006)
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AA seq
399 aa
AA seq
DB search
MQKAVYYENSGLFGGYSYAKSDAYSYNSTHQPYPSSTIENDFQSSVCTGSIQTQTIRPPS
HKSSETNSSCMRTAGSQGSSQSANISEPQQAPPLPATSPNSSSTSTQKKKSASNSSVNST
APVITKQIFPWMKESRQNSKHKSNCTAAQAGDTCDDKSPQGPASKRVRTAYTSAQLVELE
KEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKSKGIMHSPIGQSPDRS
PPLSGSNHIGYSSQIPNVNSLNYDAHSPASFSKPHQNMYGLAAYTAPLGGCLPQQKRYPG
SEYEHHTMQGNGGFTNPNLQGSPVYVGGNFVDSMPASGPMFNLGHLPHPSSASVDYSCAA
QIPGNHHHGPCDPHPTYTDLTSHHTSQGRIQEAPKLTHL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagctgtctactatgagaattctggactttttgggggctattcttatgctaaa
tctgatgcatacagttacaattctacccaccaaccatacccatcatccactattgagaac
gattttcagagttctgtatgtaccggttctatacaaacacaaactattagaccccctagc
cataaatccagtgaaacaaatagcagctgcatgagaacagctggcagccagggcagcagc
caatcagctaacatcagtgaaccgcagcaagcacctcctttgccagcaacttcgcctaac
tcaagtagtacttcaacacagaaaaaaaagtctgcatccaactcttcagttaactctacc
gccccggttattacaaagcaaatattcccgtggatgaaggagtcccggcaaaactcaaaa
cacaaaagtaactgcacagctgcacaagcaggggatacttgtgatgacaaaagtccacaa
gggccagcatcaaagagggtccgtactgcctacaccagcgcccagcttgtagaacttgaa
aaggagtttcattttaaccggtacctgtgtcgtccacgcagagtcgagatggccaattta
ttgaacctcacagagcgtcaaataaagatctggtttcaaaacaggaggatgaagtacaaa
aaagatcagaaatccaagggaataatgcactctcccattggacaatctccagatagaagc
ccgccattaagtggctcaaatcatattggatattcaagccagatcccaaatgtaaacagt
cttaactatgatgctcattccccagcatcattttctaagccacatcaaaatatgtatggc
ttggcagcttatacagcaccattaggtggttgcctcccacagcaaaagaggtacccagga
tcagaatatgaacatcataccatgcaaggcaatggtggctttaccaatcctaatttgcaa
ggcagccctgtgtatgttggagggaattttgttgattccatgccagcctcgggtcctatg
ttcaaccttggccatctccctcatccttcatccgccagtgtggactacagctgcgctgct
cagattcctggtaaccaccaccacggaccttgtgacccccatcccacatacacagatctg
acttctcatcacacatcgcagggaaggattcaggaagcacctaaacttacgcatctgtag
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