Polyodon spathula (Mississippi paddlefish): 121322389
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Entry
121322389 CDS
T07273
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-4 isoform X1
KO
K04865
voltage-dependent calcium channel beta-4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04260
Cardiac muscle contraction
pspa04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121322389
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
121322389
04261 Adrenergic signaling in cardiomyocytes
121322389
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121322389
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
121322389
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Ortholog
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GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
Motif
Other DBs
NCBI-GeneID:
121322389
NCBI-ProteinID:
XP_041118215
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Position
10:complement(44307226..44348941)
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AA seq
519 aa
AA seq
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MSRQLYTRHMLGDGLQTPIFQVTRGTQSRRSRLKRSDGSTTSTSFILRQGSADSYTSRPS
DSDVSLEEDREGVGQEREQQAALQLERAKAKAVAFAVKTNVSYCGALDEDVPVAGTGISF
DAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLKLENIRIQQEQKRGRFHGKSSGNSS
SSLGEMVSGTFRATPPSAAKQKQKVTEHVPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKA
LFDFLKHRFDGRISITRVTADISLAKRSVLNNPSKRAIIERSNTRSSLAEVQSEIERIFE
LARSLQLVVLDADTINHPAQLIKTSLAPLIVHVKVSSPKVLQRLIKSRGKSQSKHLNVQL
VAADKLAQCPPEMFDIILDENQLEDACEHLAEYLEAYWRATHAPSSTPMNPVLGRNLGST
ALSPYPAAISGLQGQRMRHNNHSGDHSPIERRSLMTSDENYHSERARKSRNRLSSGSQHS
RDHYPLVEEEYSDSYQDTYKPHRTHGSPGGYSHDSRHRL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtccagacagctttacaccagacacatgcttggagatggactgcaaacacccatcttt
caggtgactagaggaactcagtccaggagaagcagactaaagagatctgatggcagcacc
acctccaccagctttattctgagacagggttcagcagactcctacactagcaggccgtct
gattccgatgtctctctggaagaggaccgggagggagtcgggcaggagcgagagcagcag
gcggcactgcagttggaaagggccaaggccaaggcggtagcgttcgcagtgaagaccaat
gtcagttactgcggcgccctggatgaggatgtaccggtagcaggcactggcatttccttc
gatgccaaggactttctacacattaaagagaagtacaacaatgactggtggataggacgc
ctggtgaaggagggctgtgagattggatttataccaagccccctcaaactggagaacatc
cgaatccagcaggaacaaaaaagggggcgcttccacggtaagtccagtggaaattcctct
tcaagtctaggagagatggtctctggcacgttcagagctacacccccctccgcagcaaag
cagaaacagaaagtgacagagcacgttcctccatatgacgtggttccctccatgaggccc
gtggttctggtcggcccatcattgaaaggatatgaggtgacagacatgatgcagaaagct
ctgtttgacttcttgaagcacaggtttgatggaaggatatctataacaagagtcactgca
gacatttctctcgccaagcggtctgtgctcaacaatcccagcaagagagccattattgag
cgctcaaacaccaggtctagtttagctgaggtgcagagtgaaatagaaagaattttcgag
ttggcacggtcgctccagttagtagttctggatgctgataccataaaccacccagcacag
cttatcaagacatctttagcacctcttatcgtccatgtcaaagtgtcgtcaccaaaggtt
ctgcaacgattgataaaatccagagggaaatcccaaagcaaacatctgaatgtccagttg
gtggccgctgacaagctagcacaatgccctccggaaatgtttgatatcattttggatgag
aaccagctggaagatgcttgtgaacacttggccgagtacctggaggcctattggcgtgcc
acgcatgcccccagtagcactcccatgaaccctgtgctgggacggaacctgggctccacg
gcgctctccccataccctgcagctatctctgggttacagggccaaagaatgaggcacaac
aaccattctggagaccactccccaatcgagcgtcggagcctgatgacctcggacgagaac
taccacagcgagagggcaagaaagagccggaaccgcctgtcgtcgggttctcagcacagc
cgggaccactacccgctggtggaagaagagtactccgactcctaccaggacacgtacaaa
ccacaccgcacccacggctctcctggcggctacagccatgactcaaggcacaggctttga
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