KEGG   Polyodon spathula (Mississippi paddlefish): 121322407
Entry
121322407         CDS       T07273                                 
Name
(RefSeq) ras-related protein Rab-5B-like
  KO
K07888  Ras-related protein Rab-5B
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137  Mitophagy - animal
pspa04144  Endocytosis
pspa04145  Phagosome
pspa04148  Efferocytosis
pspa05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121322407
   04145 Phagosome
    121322407
   04137 Mitophagy - animal
    121322407
   04148 Efferocytosis
    121322407
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121322407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pspa04131]
    121322407
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pspa04147]
    121322407
   04031 GTP-binding proteins [BR:pspa04031]
    121322407
Membrane trafficking [BR:pspa04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    121322407
 Endosome - Lysosome transport
    121322407
Exosome [BR:pspa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121322407
  Exosomal proteins of other body fluids (saliva and urine)
   121322407
  Exosomal proteins of colorectal cancer cells
   121322407
  Exosomal proteins of melanoma cells
   121322407
GTP-binding proteins [BR:pspa04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    121322407
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA RsgA_GTPase MMR_HSR1 SDR-like AAA_16 Tfb2_C
Other DBs
NCBI-GeneID: 121322407
NCBI-ProteinID: XP_041118257
LinkDB
Position
10:44762482..44770492
AA seq 213 aa
MASRGSARPNGLGQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQS
VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQRQ
ASPNIVIALAGNKSDLAERRMVEYEEAQTYAEDTGLLFMETSAKTAMNVNELFLAIAKKM
PKTDTQNLTHAARHRGVNLHDAEAQSSRGCCGN
NT seq 642 nt   +upstreamnt  +downstreamnt
atggccagcagagggagtgcccggcccaacggcttgggccagaccaagatatgccagttc
aaactggttctgctgggagacatggcggtgggcaagtccagcctagtgcttcgattcgtc
aaggggcagttcgacgagttccaggagaccacgataggggcggcgttcctggcgcagtct
gtgtgtctggatgacacgacagtgaagtttgagatctgggacacggcggggcaggagaga
taccacagcctggcgcccatgtactacagaggagcgcaggctgccattgtggtgttcgac
atcaccaaaccggagacgtttgagcgtgcgaaggcctgggtgaaggagctgcagagacag
gccagccccaacatcgtcatcgcactggctgggaacaagtccgacctggcagagaggcgc
atggtggagtacgaggaggctcagacgtacgccgaggacacagggctgctcttcatggag
acttcagctaagactgccatgaacgtcaacgagctgttcctggccatcgcaaagaagatg
ccaaaaacggacacgcagaatctgacacacgctgccagacatcgaggggttaacctgcat
gacgcagaggcacagtccagcagggggtgctgtggcaactaa

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