Polyodon spathula (Mississippi paddlefish): 121322422
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Entry
121322422 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2-like isoform X1
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121322422
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121322422
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
HECT type E3
121322422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
Motif
Other DBs
NCBI-GeneID:
121322422
NCBI-ProteinID:
XP_041118287
LinkDB
All DBs
Position
10:45099145..45151305
Genome browser
AA seq
1495 aa
AA seq
DB search
MAMAASAREHLQYVRRRNPQMRYTLSPENLQSLAAQNAGPAEPMSFQRANSDTDLVTSDS
RSSLTASTYEFTLGLAQDLIISWDIKEEVDATDWIGLYHIDENCPSNVWDSKNRGVNGTQ
KGQIVWRLEPGPYFMEPEIKICFKYYHGVSGALRATTACITVKNPGVVVGAEGLAEGDMI
AQPCRKLVSFTLSDLRALGLKKGMFFNPDPYLKMSIKPGKKISFLTFAHHGQERRSTIIA
NTTNPVWRGEKYSFVALLTDVLEIEVKDKFAKSRPIIKRFLGKLVIPVQRLLERNAIGDQ
ILSYMLCRRLPTDHVSGQLQFRVEITSSVHEDASPDTMGTFLGGATVNGDPESPSDDEDM
LGNPPTARGPSPTGSEGSLLGEAAPQPLSSDTWGREEEEEQEGWPQPTESESPTHCNQTL
RQESLNDYLDALEPKPGARGGAVGPSERPIGGASPKLRSSFPTDTRLSAMLHIDSDEDEE
QLEEEGAALEGGLLMLNGGLRQLNGSRESKGEEEEEEEGMGSLHQLLKKLPSTHLLEDDE
AEERKSGAMQDHDTETTEGNGTRRLSSMACSSSFESTKEPASFFPASFSQEEEDGEATNT
ADQGGGASSEATPPASSDTLDEEGGACGGAVGGEEPQPTVSASEEEAEEIWQRRRSMQAA
GGESPEEEVTSAGTVAEAGADGSEVSSQGAAETDRDADSQSNEHQPMRSLPSVRQEISRY
QRVDESLPPNWEARIDSHGRIFYVDHVNRTTTWQKPTTPAASQVLQRSDSIQQMEQLNRR
YQSIRRTITNNRSEDQAPEAPPEDNDLMHHTIPEYRRDSTLPPSSSRSRLSLLLQSPSAK
FLTSPEFFTMLHSNPSAYRMFTNNTCLKHMITKVRRDTHYFERYLHNRDLVTFLNMFANK
QLELPRGWEMKHDHQGKPFFVDHNCRSTTFIDPRLPLQSSRPTSVLAHRQHLTRQRSHSA
GEVSTRRLVGDESRHSGPPVLPRPSSTFNTVNRNQYQDLVPVAYNDKIVAFLRQPNIFEI
LQERQPELVRNHPLREKVQFIRSEGTTGLLRLSSDADLVMLLSLFEEEVMSYVPPHVLLH
PSYCQSPRGSPVSSPQNSPGTQRANARAPAPYKRDFEAKLRNFYRKLETKGYGQGPGKLK
LIIRRDHLLEDAFNQIMGYSRKDLQRNKLYVTFVGEEGLDYSGPSREFFFLVSRELFNPY
YGLFEYSANDTYTVQISPMSAFVDNHHEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLL
RIPCELSDLEYLDEEFHQSLQWMKDNDISDMLDLTFTVNEEVFGQITERELKPGGANIPV
SEKNKKEYIERMVKWRIERGVVQQTESMVRGFYEVVDARLVSVFDARELELVIAGTAEID
LSDWRSNTEYRGGYHDSHIVIRWFWAAVERFNNEQRLRLLQFVTGTSSIPYEGFASLRGS
NGPRRFCVEKWGKITSLPRAHTCFNRLDLPPYPSFSMLYEKMLTAVEETSTFGLE
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcagcctctgctcgggagcacctgcagtatgtgcgtcggcgcaatccccag
atgcgctacacgctgagcccggagaacctgcagagcctggctgcccagaacgcaggccct
gccgagccaatgagcttccagcgtgccaacagcgacacggacctggtcacctccgacagc
cgctcctcgcttaccgccagcacctacgagttcacgctcggcctggcgcaggacctcatc
atctcctgggacatcaaggaggaggtggatgccacggactggatcggcctctaccacatc
gatgagaactgcccctcaaatgtgtgggactcaaagaaccgtggggtgaacggcacccag
aaggggcagatcgtgtggaggctggagcctgggccatacttcatggaacctgaaataaag
atctgtttcaagtactaccacggggtgagcggtgctctgcgcgcaacgacggcctgcatc
actgtcaagaaccccggggtggtggtgggagcggaggggctggctgaaggagacatgatc
gcacagccctgtcggaaactcgtcagcttcacactgtcagatctccgagccctgggcttg
aagaagggcatgttctttaaccccgacccgtacctgaagatgtccatcaagccaggaaag
aagatctccttcctcaccttcgcccaccacggccaggagagacggtccaccatcatcgcc
aacaccaccaacccagtgtggcgtggcgagaagtattcctttgtggccttgctcactgac
gtgttggagattgaggtgaaggacaagttcgccaagagccgaccgatcatcaagcgcttc
ctggggaaactcgtcatcccggtccagagactgctggagaggaacgccattggggatcag
atcctgagctacatgctgtgccggcggctccccacagaccatgtgagcgggcagctgcag
ttcagagtggagatcacctcctctgtgcatgaagatgcctctccggatacgatgggcact
ttcctagggggagcgacggtgaacggggacccggagagtccctctgatgatgaggacatg
ctagggaacccccccactgccaggggaccatcccccacaggctcagaggggtctctgttg
ggggaggcagccccccagcccctctccagcgatacctggggcagagaggaggaggaggag
caggagggatggccacagccgactgagagcgagtccccgacccactgcaaccagaccttg
cggcaggaatcccttaacgattacctggacgctctggagcccaaaccgggggccagaggc
ggggcggtgggtcccagtgagaggcccatcggcggggcctcccccaaactgaggagcagc
ttccccacggacacgcggctcagcgccatgctgcacatcgactcagacgaggacgaggag
cagctggaggaggagggtgcggcgctggagggggggctgctgatgctgaacgggggcctc
cggcagctcaatggcagcagggagtccaagggggaggaagaggaggaggaggaggggatg
ggcagcctgcaccagctcctgaaaaaattgccctccacacacctgctggaggacgacgag
gcggaggagaggaagtccggagccatgcaggaccatgacaccgagaccacggaggggaac
ggcactaggcgcctgtcatccatggcctgctcctcttcctttgagagcacaaaggaacca
gcctccttcttcccagcctccttctcacaggaggaagaggatggggaggcaacgaacact
gcagatcaaggagggggggcttcctctgaagccacaccccctgcatcctctgacaccctc
gatgaagagggaggggcctgtgggggtgcggtaggtggggaggagcctcagccaactgtc
tcggccagtgaggaagaggcagaggagatctggcagaggaggcggagcatgcaggcagca
gggggcgagtctccagaagaggaagtgacgtcagcagggactgtggcagaggcaggggca
gatgggtctgaagtctcaagtcagggagcagcagagacagaccgagacgcagactcccag
tcgaacgagcaccagcccatgcgctccctgccctccgtgcggcaggagataagccggtac
cagcgtgtagacgagtcgctacctcccaactgggaggcgcgcatcgacagccatgggcgc
attttctatgtggaccacgtgaaccggaccaccacgtggcagaagcccaccacgccggcc
gcctcccaggtcctgcagagatccgactccatacagcagatggagcagctgaaccgcagg
taccagagtatccgcaggaccataaccaacaatcgctcggaggaccaggctccagaggct
ccccctgaggacaatgacctgatgcaccacaccatcccagagtaccggcgtgacagcacc
ctgcccccctccagctcgcgctcccgcctctccctgctgctgcagtcaccctccgccaag
ttcctgaccagccctgagttcttcaccatgctgcattccaaccctagtgcctatcgtatg
tttacaaacaacacgtgtctgaagcacatgatcaccaaagtgcgccgcgacacgcactac
ttcgagcgctacctgcacaaccgcgacctggtgacgtttctcaacatgttcgccaacaag
cagctggagctgccacgtggctgggagatgaaacacgaccaccagggcaagcccttcttc
gtggatcacaactgccgcagcacgaccttcatcgacccccggctccccctgcagagcagc
cgccccaccagcgtgctggcacaccggcaacacctgacccggcagcgcagccacagcgca
ggggaggtgagcacgcgccgcctggtcggtgatgaatctcggcactcgggccccccggtt
ctgccacgtccatccagcaccttcaacacagtgaaccggaaccagtaccaggacctggtg
ccagtggcctacaatgataagatagtggcgtttctgagacagcccaacatcttcgagatc
ctgcaggagaggcagccggagctcgtcaggaaccatccgctcagggagaaggtacagttc
atccgcagtgagggcaccacagggctgctgagactctccagtgatgcagacctggtcatg
ctgctcagtctgtttgaagaggaggtgatgtcatacgtgcctccacacgtcttactgcat
cccagttactgtcagtcaccacggggctcgccagtctcctccccacagaactctccaggt
acccagagagccaacgcccgcgcccctgcaccctacaagagagactttgaggccaaactg
cgcaacttctaccggaaactggagaccaagggctatggacaggggccggggaagttaaag
ctcatcattcggagagatcacctgctggaagacgccttcaatcagatcatgggctactcc
cgcaaggacctgcagaggaacaagctctacgtcaccttcgtgggagaggaggggctggat
tacagcggcccctcgagggagttcttcttcctggtgtcccgggagctgttcaatccgtac
tacggcctgtttgagtactcggctaatgacacctacaccgtgcagatcagccccatgtct
gccttcgtggacaaccatcacgagtggttccggttcagtggccgtatcctgggcctggct
ctcattcaccagtacctgctggacgccttcttcacaagacccttctacaaggggctgctg
aggatcccctgtgagctgagtgatctggagtacctggacgaggagttccaccagagcctg
cagtggatgaaggacaacgacatcagcgacatgctggacctcaccttcaccgtcaacgag
gaggtcttcggacagatcactgagcgtgagctgaagccagggggcgctaacatccctgtg
tcagagaagaacaagaaggagtacatcgagcgcatggtgaagtggaggatcgagaggggc
gtggtgcagcagactgagagcatggtccgtggcttctacgaggtggtggatgcccggctg
gtgtcagtgttcgatgcccgggagctggagctggtgatcgctggcacagcggagattgac
ctgagtgactggaggagcaacacggaatacagaggaggttaccatgacagccacattgtg
atccggtggttctgggcagcagtggagcggttcaataatgagcagaggctgcggctgttg
cagtttgtgacagggacctccagcatcccctacgagggctttgcttctctgcgcgggagc
aatggacccaggaggttctgtgtggagaagtggggcaagattacctcgctacccagagct
cacacctgttttaaccggctggacctgcctccctacccctccttctcaatgctgtacgag
aagatgctgactgcggtggaggaaacgagcaccttcggcctggagtga
DBGET
integrated database retrieval system
