Polyodon spathula (Mississippi paddlefish): 121322435
Help
Entry
121322435 CDS
T07273
Name
(RefSeq) short/branched chain specific acyl-CoA dehydrogenase, mitochondrial-like isoform X1
KO
K09478
short-chain 2-methylacyl-CoA dehydrogenase [EC:
1.3.8.5
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00071
Fatty acid degradation
pspa00280
Valine, leucine and isoleucine degradation
pspa01100
Metabolic pathways
pspa01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
121322435
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
121322435
Enzymes [BR:
pspa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.5 short-chain 2-methylacyl-CoA dehydrogenase
121322435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-GeneID:
121322435
NCBI-ProteinID:
XP_041118335
LinkDB
All DBs
Position
10:complement(6534208..6541790)
Genome browser
AA seq
443 aa
AA seq
DB search
MSAALVRNCFKLGRNFVRPWSLASAWKVQSSVTRSIISEAAAAEHASANSVLYAPLQTFT
EEESMMKEADFFFWFTVKKFAQERIAPLVSKMDEDSRMDESVILGLFEQGLMGIEIPEQY
GGTGSTFFSSILVIEELAKVDPSVAVLCDIQNTLINTLFRDHGTEEQKQCYLTRLANDMI
GSFCLSEPQSGSDAFSLKTRADKHKDYYTINGSKLWISNAEQAGVFLVMANVNPSAGYKG
ITCFILDRDTEGLHIGKKENKLGLRASSTCPLTFDNVKVPEKNILGQLGQGYKYAIGMLN
EGRIGIAAQMLGLAQGCFDNTIPYTKQRVQFGKRIFDFQGMQHQIAHVATQLEAARLLTY
NAARLRETGRPFIKEASMAKYFAAEVATLASSKCIEWMGGVGFTKDYPIEKYYRDCKIGT
IYEGTTNVQLTTIAKAIDQEYEA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgccttggttagaaactgttttaagcttggaagaaattttgttagaccatgg
agcctggcgtctgcttggaaagtacagtcatctgtaaccaggtctatcatatcagaagca
gcagcagcagaacatgccagtgcaaacagcgtcctttacgcccccctccaaactttcacc
gaggaagagtcaatgatgaaggaagcagattttttcttttggtttacagttaagaagttt
gcccaagagcgcattgctccattagtgtcgaaaatggacgaggactcgcgcatggacgag
tcagttatcctcgggctatttgaacaagggctgatgggcattgagatcccagagcagtat
ggagggactggctccactttcttctcttccatcctggtcatcgaggagctggctaaagtg
gacccatcagtggctgtgctgtgcgacatccagaacactctcatcaacaccctcttcaga
gaccatgggactgaggagcagaagcagtgttatctcaccagactggccaacgacatgata
ggcagtttctgcctttcagagccacagtctggcagcgatgccttttcgttgaaaacccga
gctgacaagcacaaggactactacaccatcaacgggtccaagctgtggattagcaatgcg
gagcaggctggcgtgttcctggttatggccaacgtaaacccctctgctggttacaagggg
atcacctgcttcatcttggacagagacacagaggggcttcacatcgggaagaaggaaaac
aaactgggcctcagggcatcgtcaacctgccctctgacctttgacaacgttaaggttcca
gagaagaatatcttgggacagttaggccaaggatacaagtatgcaatcggaatgctgaat
gaggggaggattggaatagctgcccagatgctgggcttggctcagggctgctttgacaac
accattccatacaccaagcagagagtgcagtttgggaaaaggatctttgactttcagggc
atgcagcatcaaatagcccacgtggctacccagctggaggcagcccggctgctaacgtac
aacgcagcgcgcttgagagagactgggagacccttcatcaaagaggcctccatggctaaa
tactttgctgcagaggtcgcaaccttggcaagctctaaatgtattgagtggatgggaggg
gttggatttactaaagattatcccattgaaaaatactacagagactgcaaaataggcaca
atttacgaagggacaacaaatgtacagcttaccacaatagcaaaggccatcgaccaggag
tacgaagcctga
DBGET
integrated database retrieval system
