Polyodon spathula (Mississippi paddlefish): 121322444
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Entry
121322444 CDS
T07273
Name
(RefSeq) ankyrin repeat and SOCS box protein 18-like isoform X1
KO
K10340
ankyrin repeat and SOCS box protein 18
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121322444
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121322444
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
SOCS_box
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
121322444
NCBI-ProteinID:
XP_041118360
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All DBs
Position
10:46039585..46072114
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AA seq
463 aa
AA seq
DB search
MMRAVLTDGHVQLQGKKPLSTMEFISPLAIQDPIYKEEEEEEAFKVEKQDIPAVRKHLMT
FSCPDVLKTLLSQHWKDLQEGFSDSEELNKEIEFQSDELKWTATKMGLWSLEYKRELTNP
LCITAAQGYTDCLRYLLEHGARPNLAPGGKTALHEACENNNPECAMLLLQHGANPNLLNE
DGLAPLHLCKTSQSFRCAKVLLKYGAVVSQPSEEECQTPLHVVAKHGLSNHLHLYLRNGA
AVDCADSSGETPLGAACAGAQSPEELEDYLQVCRLLLLYGADANAVDKENRSPLHKACRN
AQHSLVMLLLENKADINAIDYNGGSPLSNVLQNSNLKQDLQPHLTVQSLLNHGAHKVWPM
AFLKVLTLCASAPETIEVLFNSYHQILVTYKWMEAVPEEIYQIHQSFYESLFSLEGRPRC
LQHMCRSAIRKQCGHKCHVIITQLPLPKFLQRYLLLETQGVVY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgggccgtgctgaccgacgggcacgtccagctgcagggcaagaagccactgagc
accatggagttcatcagccccctagccatacaagaccccatctacaaggaggaggaggag
gaggaagccttcaaggttgaaaaacaagacatccccgctgtgagaaagcacctaatgacg
ttttcctgcccggatgttttgaagactctcctctcccagcactggaaggacctgcaggag
ggattttcagattctgaagagctcaacaaagagattgaattccagagcgatgaactgaaa
tggacagccacgaaaatggggctgtggtcactggagtacaagagggagctcaccaaccca
ctgtgcatcacggcagcgcagggctacacagactgcctgcgctacttgctggagcatggt
gcccggcccaacctcgctcccgggggcaagactgcgctgcacgaggcctgcgagaacaac
aaccccgagtgtgctatgctgctcctgcaacatggggccaaccccaacctgctgaacgag
gacgggcttgcacccctgcatctctgcaagacatcgcagtcattcagatgtgccaaagtc
ttactgaagtacggcgctgtggtcagtcagcccagtgaggaggaatgccagactcccctg
catgtggtggccaagcatggcctgagcaaccacctgcacctgtacctgcgcaacggggcg
gcggtggactgcgctgacagctctggagagaccccgctgggggccgcctgcgctggggcc
cagagccccgaggagctggaggactacctgcaggtttgccgcttgctgctcctttacggg
gccgacgccaacgcggtggacaaggagaacaggagccccctgcacaaggcttgcaggaac
gcccaacacagcctggtcatgctgctcctggagaacaaggctgacatcaatgccattgac
tacaacggggggtcgccgctttccaacgtgctgcagaacagcaacctcaagcaggacctg
cagccgcacctcaccgtgcagagcctgctcaaccacggggctcacaaagtctggccgatg
gcttttctcaaggtgttgacgttgtgcgcttctgcacctgaaacaattgaagttttgttt
aattcctatcaccaaatcctggtgacatacaagtggatggaggctgtcccagaggaaatc
tatcagattcaccagagtttctacgagtctctgttttcgctggagggcaggcctcgttgt
ctccagcacatgtgtcgttccgccatacggaaacaatgcggccacaagtgtcatgtcatc
attacacaactgccactgccaaagttcctacaacgataccttttactagaaacccagggt
gtggtctactag
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