Polyodon spathula (Mississippi paddlefish): 121322449
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Entry
121322449 CDS
T07273
Symbol
lrit3a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121322449 (lrit3a)
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121322449 (lrit3a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_1
Ig_2
LRR_5
LRR_14
ig
fn3
Fn3_ELFN
FAM163
LRRNT
Insulin_TMD
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
121322449
NCBI-ProteinID:
XP_041118397
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All DBs
Position
1:75748578..75758018
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AA seq
642 aa
AA seq
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MYLLIYIDILLCCFTIVNPFCPSQCTCIYHGRSDGTGTRSVLCNDPDMSGIPLNIPVDTV
KLRVEKTVVRNIPTEAFYYLVDLKYLWVTYNSISTIDSSSFYNLKVLHELRLDGNLLSSF
PWESLQEMPNLRSLDLHNNRLTTVPADAGRYLQNIKYLDISSNKLTTLPSDLIDIWPPFS
TSANIGTDSRPERVILGLQDNPWFCDCRMSKLIELSKTFEMAIVLVDTLLTCSGPENLAG
VLFQRAELEQCLKPSVMTSATKITSPLGSNVLLRCDATGYPTPILIWTKSDGSPVNNTVV
QESPGEGIRWSIVSLNGILYQDAGEYQCKAKNLAGMSEASITLTVVGVITTTASPLRFSK
RLRAEQTVTTPMKIEPITKGLTTLSPTTLATTTLSSVLKKKPVQTSQTKPVAGGTRPTKS
QPVVNNQKPQQEDRNTTTAAVVQNITIKNLQVVDQTEQSAVVTWVVPNAPRGVALNVMYS
AYGVRDKQMINTDTGKSKISIDGLIPSTKYTACVSLKGSQPKKDQCIVFSTLDVVTEDPQ
AHILIVAGGIACAIALPLVIVLLYKVLKLYCKKSASEGDDLSKETYVKFETLSLKQKDIG
SNGDVWARRNTSESERMLLCSRSSIDSQMTFKSDNYQSEYLY
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtatctgcttatttatattgatatactgctgtgctgttttacaattgtgaacccattt
tgcccttctcagtgtacatgtatataccatggaaggagtgatgggacaggaaccagatct
gtgctgtgcaacgatccagatatgtctggcatcccactcaacattccagtggacaccgtt
aaactccgcgtggaaaaaactgtggtaagaaatattcccacggaagcattttactacctc
gtggacctcaaatatttgtgggtgacttacaattctatatctacaatcgatagcagcagc
ttttacaacctgaaagtgcttcacgaactacgccttgatggaaacttactttcatctttt
ccgtgggagtcgctgcaagaaatgcctaatctgcgatctctggatctgcacaacaacaga
cttacgacagtcccagcggatgcgggtcggtaccttcaaaacatcaaatatttagatatt
tccagcaataaattaaccacactgccatcggatttaatagatatttggccaccgttttcg
acaagtgcgaacataggcacggattcacgtcctgaacgagtaatattaggtttgcaagac
aacccatggttttgtgactgtagaatgtcaaagctgatagagctctccaagacatttgag
atggctattgtgcttgtggatacgcttctgacgtgcagtggtcctgagaacctggcagga
gttctcttccagagagctgaactggaacagtgcctaaaaccttcagtgatgacctcagcg
acaaagattacctcaccgctggggagtaatgttctgcttcgctgtgatgctacagggtat
cccacacccattctgatctggaccaaatctgatggttctccagtgaacaacacagtagtt
caggagtctccaggagaaggaatcaggtggtctattgtaagcttgaatgggattttatac
caggatgctggtgaataccaatgtaaagctaaaaaccttgctgggatgtccgaagcttcc
atcactctgactgtggttggagtcatcaccacaacagcgtctcctctgaggttttcaaag
cgactgagagcagaacagactgtcaccactccgatgaaaatagaaccgattactaaaggg
ttaacaacactgtctcctacaactctagctaccaccacactaagcagcgttctgaagaaa
aagcctgtacaaactagccaaactaagccagttgctggggggacaaggcccacaaagtca
caaccggttgtcaacaaccaaaagccacaacaggaagatagaaacacaacaaccgcagct
gtagtccaaaatatcaccatcaaaaacctgcaagttgtggatcaaactgagcagagtgca
gtggtgacttgggtggtgcctaatgcccctagaggtgttgctctgaatgtgatgtactca
gcatacggtgtaagagataagcaaatgattaacacagacacagggaaaagcaaaatctcc
attgatggattaattccaagcactaaatacacagcgtgtgtgagcctaaaaggaagtcaa
cctaagaaagaccaatgtattgttttctccacattagacgttgtgacggaagacccccag
gcacacattctgattgttgctggcggcatcgcctgtgccattgcgctgcctctggtcatt
gtactgctttataaagttttgaaactgtactgtaaaaagagtgcttctgagggtgatgat
ctttccaaagagacatatgtcaaatttgagacattgtcactgaagcagaaagacataggc
tctaatggagacgtgtgggctcgcagaaacacttccgaatcagagagaatgctcctttgt
tccaggtccagcattgactcccagatgacctttaaaagtgacaattaccaatcagaatac
ttatactag
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