Polyodon spathula (Mississippi paddlefish): 121322459
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Entry
121322459 CDS
T07273
Name
(RefSeq) unconventional myosin-Ib isoform X1
KO
K10356
myosin I
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121322459
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121322459
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121322459
03036 Chromosome and associated proteins [BR:
pspa03036
]
121322459
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121322459
04147 Exosome [BR:
pspa04147
]
121322459
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121322459
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Phagocytosis
Others
121322459
Others
Actin-binding proteins
Myosins
121322459
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121322459
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121322459
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121322459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
IQ
nSTAND3
Zeta_toxin
AAA_16
AAA_22
TPR_Nup160_C
Motif
Other DBs
NCBI-GeneID:
121322459
NCBI-ProteinID:
XP_041118416
LinkDB
All DBs
Position
10:47292818..47357816
Genome browser
AA seq
1173 aa
AA seq
DB search
MGDMSKMEVKTSLLDNMIGVGDMVLLEPLTEKSFIENLRKRFNHNEIYTYIGSVVISINP
YRSLPIYTPDKVEEYRNRNFYELSPHIYALADEAYRSLRDQDKDQCILITGESGAGKTEA
SKLVMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFK
GDPLGGVISNYLLEKSRVVKQPRGERNFHIFYQLLSGASEDMLKKLKLERDFSKYNYLSL
DSATVTGVDDASCFRTVKNAMQIVGFMDDETQSVLELVGAVLKLGNIEFKPESRVNEVDE
SRVKDKNELKEICELLGIDQSVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLY
SRLFTWLVNRINESIKAQTKKRKKVMGVLDIYGFEIFESGENSFEQFIINYCNEKLQQIF
IELTLKEEQEEYIREGIEWTHIEYFNNSVICDLIENNTNGIMAMLDEECLRPGTVTDSTF
LEKLNQICADHQHFESRMSKSSKFLNDHSLPHNCFRIQHYAGKVLYHVDGFVDKNNDLLY
RDLSQAMWKANHSLIKSLFPDGNPAKINLKRPPTAGSQFKASVATLMKNLQTKNPNYIRC
IKPNDQKASHIFTDSLVCHQVRYLGLMENVRVRRAGYAFRQPYEACLERYKMLCKQTWPH
WRGQARDGVEVLLKDLQIPAEEYSYGRSKIFIRNPRTLFSLEEQRKRRLHGLATLIQKIF
RGWKARTHFLLMKSSQVTVAAWYRRYAQQKKYKKTKSSAVIVQSFIRGWKARKILRELKY
QKRCKEAVTTIGAYWHGTQARRELRCLKEEARNRRAVTVIWASWQGTKARRELRCLKEEA
RNRRAVTVIWASWQGTKARRELKRLKEEARCKHAVDVIWAYWLGLKVRREYRKFFRAHAG
KRIYEFTIQRIIQKYFLELKNKMPSMSPCDKTWPARPYLFLDSTHKELRRIFHLWTCKKY
RGQFTDQKKAIYKEKLEASEIFKDKKALYPSSVGQPFQGDYLEINKNPRYQKLNSLVEEK
IIFADIVNKINRANGKGAQRIFLLTKNKFMLADQKSGHQVKSIVPLAELTSVSMSAQSDG
FFALRVKEGTTAAAKGDFLLNSERIIEIITKLHRAGLDLTKEKIQIEITDEFLVQFKQDK
VCVKFIQSNPKNGTMASCKRKNNRLLEVTVPSP
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgggagatatgtccaagatggaggtgaaaacgtcacttctcgacaatatgattggggtg
ggtgacatggtgttactggagcccctaactgaaaagtctttcatagagaacctgaggaaa
agattcaaccacaacgagatatacacctacattggcagtgtggtgatctccatcaacccc
tatagatctctgcccatctacactccagataaggtggaggagtaccgcaacaggaacttc
tatgagctcagccctcacatttatgccttggcagatgaagcctaccgatccttacgggac
caggacaaggaccagtgtatcctcatcacaggggagagtggggccgggaagacagaggcg
agtaagctggtcatgtcctatgttgctgcagtgtgtgggaagggagcagaggtgaaccaa
gtcaaggagcagctcctccagtcaaacccggtgcttgaggcttttggaaacgcgaagacc
gtgaggaacgacaactcgtctcgctttggaaaatacatggatattgaatttgatttcaaa
ggagacccgctgggcggagttatcagcaactatcttctagagaagtcccgtgtcgtcaaa
cagccgagaggggagaggaacttccacatcttctatcagcttctgtctggggcatcagag
gacatgctgaagaaactgaagctggagcgggacttcagcaagtacaactacctgagcctg
gactctgccacagtgaccggggtggatgacgcgtcctgcttccgaacagtgaagaacgcc
atgcagatcgttggcttcatggacgacgagacgcagtctgtgctggagttggtgggagcc
gtgctcaaactggggaacatcgagttcaaaccggagtcgcgagtcaacgaggtggatgag
agccgcgtcaaggataaaaacgagctgaaggagatctgtgagctgctggggattgatcag
tctgtcctggagagagcgttcagtttccgcactgtggaggccaaacaggagaaggtttcc
actactctcaacgtggcccaggcatattatgcccgagatgccttggctaaaaacctgtac
agccgtctcttcacctggctcgtaaaccgaatcaacgaaagcattaaggcacagacgaaa
aagagaaagaaggtcatgggggttctggacatttatggatttgaaattttcgagagtggc
gaaaacagtttcgagcagttcatcattaactactgcaacgaaaaactccagcagatcttc
atagaacttacgctgaaggaggaacaggaggaatacatccgagagggtattgaatggacg
cacattgagtatttcaacaattctgtcatctgtgacctgattgaaaataacaccaacggc
atcatggccatgctggacgaggagtgtctgcgccccgggaccgtcacggactccaccttc
ctggagaagctcaatcagatctgcgcggaccaccagcactttgagagccgcatgagcaag
agctccaagttcctcaacgaccacagcctgccccacaactgcttccgcatccagcactac
gccggcaaggtgctgtaccacgtggacggcttcgtggataagaataacgacctcctgtac
cgggacctctcccaggccatgtggaaagccaatcacagcctcattaagagcctcttcccc
gacggaaaccccgccaagatcaacctcaagagaccccccaccgccggctcccagttcaag
gcctcggtggcaacgctcatgaagaacctgcagaccaaaaacccaaactacatcaggtgc
atcaagcccaacgaccagaaggcgtcccacatcttcacagattcgctggtgtgccaccag
gtgcgttacctgggcctgatggagaacgtgagggtgaggagggcgggctatgctttccgc
cagccctacgaggcctgcctggagcgctacaagatgctgtgcaaacagacctggccacat
tggagggggcaagccagggatggtgtggaggtgctcctcaaagaccttcagatcccagca
gaggagtactcctacggcaggtcaaagatattcataagaaatcccagaacgctcttttcc
ctggaggaacagaggaagcggcgcctgcacgggctcgccacactcatccagaagatcttc
cgcggctggaaggcccgcacccacttcctgctgatgaagagcagccaggtcactgtcgct
gcctggtaccgcagatatgcgcaacaaaagaagtacaagaaaacaaagagctctgcggtc
atcgtccagtctttcattcgaggctggaaggctcgcaagatcctgcgggaactgaagtac
cagaagcggtgcaaggaggctgtgacgactatcggagcatactggcacggaactcaggca
cggagggaactgaggtgtctgaaggaggaagccaggaatagacgcgcagtcactgttatt
tgggcttcctggcagggaacgaaggcacggagggaactgaggtgtctgaaggaggaagcc
aggaatagacgcgcagtcactgttatttgggcttcctggcaggggacaaaggcccgcagg
gagctgaaacgcctaaaggaagaagccaggtgtaaacacgcagtcgatgtcatttgggct
tattggcttggactgaaggtgcgtcgggagtacaggaagttcttccgggcccatgctggc
aagaggatctacgagtttactatccagagaatcattcagaagtacttcctggagctaaag
aataagatgccctcgatgtccccctgcgacaagacctggccagctagaccctacctcttc
ctggactccacccataaggagctgaggagaatcttccacctctggacgtgcaagaaatac
aggggccagttcacagaccagaagaaggcaatttacaaggagaagctggaggctagcgag
atctttaaggacaagaaggccttgtaccccagcagcgtcggtcagccgttccaaggggac
tacctggaaatcaacaaaaaccccagataccagaaactcaacagcctggtggaggagaag
attatctttgcagacattgtgaacaaaatcaacagggccaatggcaagggagctcagcga
atcttcctgctgaccaagaacaaattcatgctggctgaccagaagtcgggtcatcaggtc
aagtccattgtacccctggctgagctcaccagtgtctccatgagcgcgcagagtgatggg
ttctttgctctgcgggtcaaagaggggacgacagccgctgccaagggggatttcttactg
aacagtgagcggataattgagatcatcaccaaactgcaccgggcaggactcgacctgacc
aaggagaagattcaaatcgagatcacggatgagttcctggtccagttcaagcaggacaaa
gtgtgcgtgaagttcatccagagcaaccccaagaatggcaccatggcctcctgcaaacgg
aagaacaatcggctgctggaggtgaccgtgccgtcgccatag
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