Polyodon spathula (Mississippi paddlefish): 121322464
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Entry
121322464 CDS
T07273
Name
(RefSeq) rab11 family-interacting protein 2-like
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121322464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121322464
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121322464
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
C2_GRDP
Motif
Other DBs
NCBI-GeneID:
121322464
NCBI-ProteinID:
XP_041118433
LinkDB
All DBs
Position
10:complement(21303344..21342477)
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AA seq
510 aa
AA seq
DB search
MSLAEQSQKWFPTHVQATVLQAKDLHPKGKNGTNDTYTIIQLGKEKYSTSVAEKTLNPVW
KEEASFELPGLLLEGNLEKYTLNLIVMHRSLVGLDKFLGQVSISLNEIFDNKERRKIDWF
KLESKPGKKGKDRGQIQVNIQFMRNNMTASMFDLSMKDKPRSPFSKLKDKMKRGKGDGTF
SDTSSAILPRTSTPRSSDPDISEMNQHMKPKPKRTFLLGPQRLSAAHSMSDLIGSHFSGD
KVKASTIGHAPLFRPKLDSMNSIDESGNVISPHRRSQSVDTANPEQPGYTSTEGKGSYEG
HSDLFTNISDSLPQKSATLPRNKNPFEPSSGVSWEGRTNVRSEKKKEKVGLLERVKGKKD
GKKLDKIGNGKSGSSSDLRSPNPFIDSLQGDAGTNPFSTNYKSNTSSNLMEPSGIEDIKK
ALTPNSSAYPRDEAKEGNPFNSVASYRNLSFEEVVQELIKQKELVKKKDAHIRELEDYID
GLLVKVMEETPSILRVPYELAKKAGKFSKQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttgcagaacagtctcaaaagtggttcccaacccacgtccaggccaccgttctg
caagccaaagacctccacccgaaaggcaagaacggtaccaatgacacttacaccatcatt
cagttaggcaaagaaaagtactccacctccgtagccgagaagaccctgaatccggtgtgg
aaagaggaagcttcctttgaacttcccggtctacttctggagggcaatctggaaaaatac
actctcaacctgatcgtgatgcacaggtcattggtgggactggacaagtttctggggcaa
gtgtctatcagcctcaatgaaatctttgacaacaaggaaagaagaaaaattgactggttc
aaacttgagtccaagcctgggaagaagggaaaggaccgagggcaaatccaagtcaacata
cagttcatgaggaacaacatgacagccagtatgtttgacctctccatgaaagacaagcca
cgctcgccgttctccaaactcaaagacaagatgaagagagggaagggggacgggaccttc
tccgacacctcttctgccatcctccccaggacgagcacccctcgctcttctgaccccgat
atctccgagatgaatcagcacatgaaacctaaaccaaaaagaacgttcctcctagggccc
cagcgtctgtctgctgcccactccatgtctgatttgatcggatcccatttctctggagac
aaagttaaggctagcacaatcgggcatgctccactctttcgccccaagctagactccatg
aattccatcgatgagagtggaaatgtgatctctccccatagacgatcgcagagcgtcgac
actgccaaccctgagcagcctggctacacttccactgagggtaaaggcagctatgaagga
cacagtgatctgttcaccaacatcagcgattctttgccccaaaagtcagccactctgccc
cggaacaaaaacccctttgagccgagcagtggtgtctcatgggagggcaggaccaatgtc
agatctgagaagaagaaggagaaagtggggcttttggagagagtcaaggggaagaaagac
ggcaagaagttggataagatcggcaatgggaaatcaggtagttccagtgacttgaggtct
cccaatcctttcattgacagtctacaaggggatgcaggaacaaaccccttctccacaaac
tataagtcaaataccagctccaacttaatggagccttcaggcattgaagacatcaagaaa
gctttaacgccaaacagcagtgcctaccccagggacgaggcaaaggaaggaaaccctttc
aattcagtggcatcttatcgcaatctttcgttcgaagaggtcgttcaagagttgatcaag
cagaaggaattagtgaaaaagaaggacgcccatattcgcgagctggaggactacatcgac
ggccttcttgtcaaggtcatggaggaaactcccagcatcctcagagtgccatacgagcta
gccaagaaagcagggaaattttccaaacagtaa
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