Polyodon spathula (Mississippi paddlefish): 121322493
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Entry
121322493 CDS
T07273
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121322493
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121322493
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121322493
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
121322493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_GCN1
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
HEAT_MROH2B_C
TOR1L1_N
Sec7-like_HUS
TPR_CAND1
TPR_DNAAF5
VPS15-like_hel
HEAT_DAAF5
Dopey_N
Cnd1
PDS5
ParcG
Paxt-1_C
TAN
Ribonuc_2-5A
MMS19_C
Motif
Other DBs
NCBI-GeneID:
121322493
NCBI-ProteinID:
XP_041118494
LinkDB
All DBs
Position
10:complement(48408359..48504037)
Genome browser
AA seq
1611 aa
AA seq
DB search
MEYCLSQVMQKDVGKRLQVGQELVDYISDREKSSDLEHDQTMLDRLVDGIATSWVNSSHF
KVALLGMDILSALIMRLQERFRAQISTVLPSLIDRLGDAKDQVRDQDQTLLLKIMEQAAN
PQYVWDRMLGGFKHKNNRTREGVCLCLIATLKIYGAQGLTLSKIVPHICNLLSDPTSQVR
DGAMNCLVEIYRHVGERVRSDLSKKGLPQSRLNVIFAKFAEVQKSGNMMPSSDKSVEDED
SVDGNRPSSASSTSSKAPPSGKKGASMGTARRPSSAAGPKTPGKEASAGAVDEEDFIRAF
GDVPAIQIYSSRELEDSMNKIREILSDDKHDWEQRVVALKKVRSLLLAGAVEYDGYFQQL
RLLEGAFKLSAKDLRSQVVREACITLGHLSTVLGNRFDHGAESIMPTLLNLVPNSAKIMA
TSGIAAINLIIRHTHYPRLIPIMTSNCTSKSVAVRRRCYTFLDLLLQEWQTHSLERHLPV
LTETIKKGIHDADSEARSVARKCYWGFHGHFSREAELLFHNLESSYQKALQSHLKNSDSI
VSLPQSDRSSSSSQESLNRPLSTKRPPAGSSMSRAVSSKSVSTPGSLQRSRSDVDVNAAA
SAKSRMTAAPSATPFSTAAALPPGSYASLDGTPAKSEGRVRTRRQSSGSAAGGSTTPADN
RGRNRAKVSQSQRSRSANPAGAGSRSGSPGKLLGHSYGRAQRGALVSTPSEKKSKIPRSQ
GCSRETSPNRLGLARSSRIPRPSMSQGCSRDTSRESSRDTSPARGFTALASRRHSRSTSA
LSTAESIGQPDRFGLSHQARISASVNAMRVLSASTEVEAAVADALLLGDSRNQRKPVRRR
FDPPGMYSDDDANSDASSACSERSYGSRNGGVPHYLRQTEDVAEVLNHCASSNWSERKEG
LVGLQNLLKSQRTLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITIHKEDLQDW
LFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVK
VAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKTLHNWVTDALPSRS
STTPSVPGEGNLEERCKQAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHSHLKN
SSNTSMGSPSNTIGRTPSRHSSSRTSPLTSPTNCSHGGLSPSRLWGWSADGLSKHPPPPS
QPHSIPAPPPHRAFRRSYSPSMLDYDTENMNSDEIYSSLRGVTEAIQSYSYRSQEDLHEP
IKREGKKDDGVCREGGMASPVTDLRVGVDVVEGGRTALDNKTSLLNTPPPRSFSGPRSRE
YNPYNYADTISTYDKSALNEAVFDDDLEQGRRQDCLENKMLHPKGFTPVPIDHSDLVADL
LKELSNHNEHVEERRGALLDLLKITREGSLAVWDEHFKTILLLLLETLGDKEHSIRALAL
RVLKEILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVL
CPIIQTADYPINLAAIKMQTKVIERISKESLHQLLPDIIPGLLQGYDNTESSVRKASVFC
LVAIYSVIGEELKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggagtactgcttgtcacaagtgatgcagaaagacgtggggaagaggctccaggtgggg
caggagctggtagactacatctcggaccgagagaagtcttcagatctggagcacgaccag
accatgctggatagactggtggatgggattgccacctcctgggtaaactccagccatttt
aaggtggctttgctgggtatggacattttatctgccttaatcatgcgattacaagagcgc
tttagagcccagatcagcacagtcctgccaagtttaattgacaggctgggcgacgcaaag
gatcaagttcgagaccaggatcaaactctgctgctaaagatcatggagcaagctgctaac
ccacagtatgtttgggaccgaatgctgggagggttcaaacacaagaacaacaggaccaga
gagggagtctgcctctgtcttattgcaactttaaaaatatatggagctcaaggtttaaca
ctaagcaaaattgtaccacacatctgtaatttattaagtgatccaactagccaggttcgc
gatggagcaatgaactgccttgtagaaatctacagacatgtaggggagagggtgcgctca
gatctcagtaaaaagggattaccccaatcaagattgaatgtaatttttgcaaagttcgct
gaagtgcaaaagtctgggaacatgatgccatcttcagataagagtgttgaggatgaagac
tctgtggatgggaacaggccttcctctgccagctccacctcctccaaggctccccctagt
ggcaagaaaggggccagcatggggacggctcgcaggccaagctctgcagccgggcccaag
actccaggaaaggaagcaagtgcaggtgctgtagatgaagaagacttcattcgggcgttt
ggtgacgttccagcgatacagatctattccagcagagagcttgaagactccatgaacaag
atcagagaaatcttatcggatgacaaacacgactgggagcagagagtagttgcactgaag
aaggttcgctctttgcttctggctggtgctgtggaatacgatggctactttcagcagctg
cgtcttctggaaggagccttcaagctatcggctaaagatctgcgttcacaggtcgtgagg
gaggcttgcatcaccctggggcatctctctacagttctgggaaacagatttgaccacggt
gctgaaagcatcatgccaactctcctcaatctagttccgaacagtgccaaaatcatggct
acatctggcatagccgctataaacctcatcatacgtcacacacactaccccaggctgatt
cccatcatgaccagtaactgcacgtcgaaatctgtagctgttagaaggcgctgctacaca
tttctagacctgctgcttcaggaatggcagacgcactcattagagagacacctgccggtc
ttgactgaaacaattaagaagggcatccacgatgcagactccgaggccagatcagtagca
agaaagtgctactggggattccatggtcatttcagtcgggaagcagagctcctttttcat
aacttggagtcttcttaccagaaagccctgcagtctcacctgaagaactcggacagcatt
gtctccttgcctcagtcagacaggtcctcctccagttcccaggaaagcctcaaccgtcct
ttgtctacaaagcggccccctgctggaagcagcatgtccagagcagtcagttccaagtct
gtgagtacccccggatccctgcaacgctctcgcagtgacgtggatgtgaacgcggcggcc
agcgccaagtcaaggatgacggcagctcccagcgccacacctttcagcactgcggctgcc
ctgcccccaggctcctacgcatctttagatggtacacccgctaaatcagagggccgagtg
cgcaccaggaggcagagttctggcagtgctgcagggggcagcacaactccagcggacaac
cggggccgcaaccgggccaaggtctcccagtctcaacgatccagatcggctaaccctgct
ggtgcgggcagtcgctccggctctccagggaagctcctgggacactcgtacgggagagct
cagcgaggggctttggtgtccactccctcggagaagaaaagcaagatccctcgcagtcag
ggctgcagcagagagaccagccccaacagactgggattagcccggagcagccgtatccct
cgacccagcatgagtcaggggtgcagccgcgacaccagtcgtgagagcagtcgagatacg
agccctgctcggggcttcactgcactggcttccaggcgtcactccaggtccaccagtgct
ctctccactgccgagtctattggacagccagatcggtttgggctttcccatcaagccagg
atttctgcttcggtgaacgccatgcgggttctgagcgctagtacagaggtggaggctgca
gtcgctgatgcactgctgttaggagactccaggaatcagaggaagccagtgcggaggagg
tttgatcctccaggcatgtactctgacgacgatgctaacagcgacgcgtccagcgcctgc
tccgagcgctcctacggttccaggaacgggggcgtccctcactacctgcggcagaccgag
gacgtggccgaggtcctgaaccactgtgccagttccaactggtctgagaggaaggagggg
cttgtgggcctgcagaatctactgaagagccagaggacactgagccgtgttgaactgaaa
aggctttgtgagatcttcaccagaatgtttgccgatcctcacagcaagagagtattcagc
atgttcttggagaccctggttgattttattaccatccataaagaggacctgcaggactgg
ctgtttgtgctgctgacacagttgttaaagaagatgggtgctgacttgctgggctctgtg
caggcaaaagtgcagaaagcgctggatgtcaccagggactccttccctttcgatcaacag
tttaacattctgatgaggtttatagttgatcaaacacaaacgccaaacctcaaggtaaag
gttgcaatcctgaagtatatcgagtctctggccaggcagatggaccccactgactttgtg
aactccagtgagactcgactggctgtttctcgaattataacctggacaacagaaccaaag
agctctgatgtgagaaagacccttcataactgggtgactgatgcgttgcctagcaggtcc
agtaccaccccttcagtgcctggggaaggaaacctggaagaaaggtgcaagcaggctgcc
caggtggtgctgatttctctctttgagttgaacaccccagagttcaccatgctgctgggt
gccttgccaaaaacattccaggatggtgccaccaaactcctgcacagccacctgaagaac
tccagcaacaccagcatgggctctccaagcaacacaattggacgaaccccctcacgacac
tccagcagcagaaccagccccctcacctcaccaaccaactgttcccatgggggattgtca
ccaagtcgcttgtggggttggagtgctgatgggctgtccaagcacccccctcccccctct
cagcctcactccatccctgctccaccccctcacagggccttcagacgctcttactctccc
agcatgctggattatgacactgagaacatgaactcggatgagatctacagctcgctgcgc
ggcgtgacggaagccatccagagctacagctaccggagccaggaggatctgcacgagcca
atcaaacgagagggaaagaaggacgatggagtatgcagagagggtgggatggcgtctcca
gttacggaccttcgtgttggcgttgatgtggtggaaggagggagaacagctctcgataac
aaaacctctttactcaacacgcctccaccacgctccttctccggcccgcggagtcgcgaa
tacaacccttacaactacgcggacacaatcagcacctatgacaagagcgctctcaatgag
gctgtgttcgatgatgatctggagcagggccgtcgccaggactgccttgaaaacaagatg
ctgcatcccaagggttttacacctgttcccattgatcactcggacctggtagctgatctc
ctgaaggagctgtccaatcacaatgagcacgtggaggagcggaggggcgccctgctggat
ctccttaagatcacccgcgagggcagcctggccgtgtgggacgagcacttcaagaccatc
ctgctgctgctgctggagacgctgggagacaaggagcactccatcagagccctggcactg
cgggtattgaaagagatcctgaggaaccagccggcacggttcaagaactatgcagagctg
acaatcatgaagacgctggaggcacataaggattcccataaagaggttgtgagggctgcg
gaggaggcagcttccactctggccagctccattcaccctgaacagtgcatcaaagtgctg
tgccccatcatccagacagccgattaccccattaacctggctgccatcaaaatgcaaacg
aaggtcattgagcgcatttcaaaggagagtctccaccagctcctcccagacattatccct
ggattgcttcagggctatgataacacagagagcagtgttcgcaaggccagtgtcttttgt
ctggttgccatctattcagtaattggagaagagctgaaaccacaccttgcacagctcact
ggaagcaagatgaagctgttgaatctgtacatcaagagagcccagaccaccaacagcaac
agcagctcctcctcggacgtgtcgactcacagctag
DBGET
integrated database retrieval system
