Polyodon spathula (Mississippi paddlefish): 121322535
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Entry
121322535 CDS
T07273
Name
(RefSeq) dynein assembly factor with WDR repeat domains 1-like
KO
K19760
dynein assembly factor with WDR repeat domains 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121322535
04812 Cytoskeleton proteins [BR:
pspa04812
]
121322535
Cilium and associated proteins [BR:
pspa03037
]
Motile cilia and associated proteins
Dynein assembly factors
121322535
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
121322535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_SPT8
WD40_RFWD3
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_like
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
WD_LRWD1
PROPPIN
CEP19
Ge1_WD40
Beta-prop_WDR19_2nd
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
121322535
NCBI-ProteinID:
XP_041118569
LinkDB
All DBs
Position
11:complement(35769163..35782017)
Genome browser
AA seq
427 aa
AA seq
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MKLKRFLLRYYPPGIVLEYEKGGELKTKSIDLLDLSPDTDIGELVEEIKKTEPLITASRT
EQVKQLVQRLQEKLGQQDDQKFYLFKVLRAHILPLTNVAFNKSGSSFITGSYDRTCKIWD
TASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEI
VCLSFNPQSTLVATGSMDTTAKLWDVQTGEEAVTLTGHSAEIISLSFNTTGDKIITGSFD
HTVSLWDVQSGRRIHTLIGHRGEISSAQFNWDCSLIVTGSMDKTCMVWDTINGKCVASLT
GHEDEVLDVCFDYTGQFIATASADGTARVYSASSQKCIAKLEGHEGEISKLCFNPQGSRI
LTGSADKTGRMWDPHTGQCLQVLEGHTDEIFSCAFNYEGNTIITGSKDNTCRIWRRDRNV
IEEKIMV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaacgattcctgcttagatattatccaccaggaatagtattggaatatgaa
aaaggaggcgagttaaagaccaaatcaatagatttacttgatctatctccagacacagat
attggtgaattagtagaagaaattaaaaaaactgaaccccttatcactgcctcacgcaca
gaacaagtaaaacagctggtacagagactacaagaaaaacttggtcaacaggatgatcaa
aagttttatctttttaaggtactccgggcacacatcttaccccttacaaatgttgcattt
aacaaatctggctcaagcttcataacagggagctatgacagaacatgtaaaatttgggat
acagcatcaggagaagagttgcacacactggaaggacacagaaatgtggtctatgcaata
gcattcaacaatccttatggtgataaaattgccactggatcctttgacaagacttgtaaa
ttatggagtgcagagacaggcaaatgttaccatacatttcgaggtcatactgcagaaatt
gtatgcttgtcatttaatccgcaaagtacactggtggcaactgggagtatggacacaaca
gcaaagctttgggatgtccagactggagaagaagctgttacattaacaggccattcagca
gaaataatttcactgtcattcaacacaacgggagacaaaattatcactggatcttttgac
catactgtttcattgtgggatgttcaatcaggaaggagaatccatactttgattgggcac
agaggagaaataagcagtgcacaattcaactgggactgctcacttatagtcacaggatct
atggataaaacatgcatggtctgggatacaatcaatggcaaatgtgttgcatcattaacg
ggacatgaagatgaagtattggatgtttgctttgattatacaggccagtttattgcaact
gcatctgctgatggaactgcaagagtttatagtgcctcatcacagaaatgcatagctaag
ctcgagggacacgagggtgaaatttccaagctttgctttaacccacagggtagtcgtatt
ttaactggaagtgctgataaaactggcagaatgtgggatccgcacacaggccagtgcctc
caggtgctggaggggcatacagatgagatattttcatgtgctttcaactatgaaggcaat
accattattacaggcagtaaagataacacctgccgaatatggcgcagagacaggaatgta
attgaggaaaagataatggtatga
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