Polyodon spathula (Mississippi paddlefish): 121322547
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Entry
121322547 CDS
T07273
Name
(RefSeq) ski-like protein
KO
K18499
Ski-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121322547
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
Motif
Other DBs
NCBI-GeneID:
121322547
NCBI-ProteinID:
XP_041118588
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Position
11:complement(39004259..39029409)
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AA seq
706 aa
AA seq
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MKKLSREKMEDTPIKKRLVAELHENGRTEGAPETPKIKKEIVEETGESESNECGRQVPIP
GPKPLDLSPGLKHTLAQFHISSQVSLGGPATFSARNTQECMSPSVFMPLASPPALPGPLL
IPSDTSTELTDSLLEGESISCFMVGGENRLCLPQVLNSVLRDFSLQQINTVCDELYIYCS
RCNTDQLHILKVLGILPFNAPSCGLITLTDAQRLCNTLLRPGTLMQNTSKHASKSTLTQL
KETDSNFKVEHECLGKCQGLFVMQLYTQPNAPCIQCLECQLMFSPQKFVMHSHKSPDKRT
CHWGFDSAKWHCYLQLGKKYYNTPEEKQLKQRLEEIKEKFSFQQKRTFEKKDHSEDFQVK
KARYNLSNLQGKLPDNDSVKKTEPQQDVLFKHWYADIKQDPDQDSGVHPSYYLYMYDKVV
APNVSLPATLTHGCDSGKLPGRAPEGNEEVLGALLKHHYHEEQKRASSCSEGSFDEEEES
QRVAKSVGAIDHHTRSCSADQVKSKHPNVCERGPLAVVMETHPSEHAFLPFIKDVSSEDD
KDKIVMEILQMYTKQQERLNATLEKKMQLQMELDLLRSPSRSTRLKELSEQCELQQELEL
VQSEQASRLEELREEQMELEKRLEQLRQQGCACDRSSERDREAQYAAQLSELRQRLDQAE
ADRQELQEDLQREREAREKLEKMITEMKLQIAEKNNQEAKVNSKNK
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagctgagtagggaaaaaatggaggacactccgattaaaaaaaggcttgtcgca
gaactgcatgagaatggcagaacagagggagcccctgaaacccccaaaataaagaaagaa
attgtggaagagactggggaatcagagtccaatgagtgtggcaggcaggttccgattcct
gggccaaagcctttggacctgagcccaggcttgaagcacaccctggcccagttccacatc
agcagccaggtctccttgggtggaccagcaaccttttcggctcgaaatacccaagaatgc
atgtctcccagcgtcttcatgccacttgcatcaccaccagccttgccaggccccctgctt
attccttctgacacttccactgagcttactgattccctgctggagggggaatccatttcc
tgcttcatggttggcggtgagaatagactatgtctcccccaggtccttaattcggtcctg
cgtgacttttccctccagcagattaacaccgtctgtgacgagttgtacatctactgttca
aggtgtaacactgaccagcttcacatcttgaaagtgctgggcattctgccattcaatgca
ccttcctgtggactcatcacactgacagatgcccagagactgtgcaatactttattgcgc
ccgggaacacttatgcagaataccagcaagcatgcaagcaagagcacattgactcaactg
aaagagaccgactcaaacttcaaggtagagcatgaatgcctgggcaagtgtcagggcttg
tttgtgatgcagttatacacacagcctaatgccccctgcatccagtgcctggagtgccag
ctgatgttttctccccagaagtttgtgatgcattcccacaagtcacctgacaagaggacc
tgtcactggggcttcgactcggccaagtggcactgctacctccagcttgggaaaaagtat
tacaatactccagaggagaagcagctgaagcagcggcttgaagaaattaaggagaagttc
agcttccagcagaaaaggacatttgaaaagaaggaccattctgaagatttccaggtgaaa
aaggcacgctacaacctctcaaatctgcagggcaagctacccgacaatgactctgtcaaa
aagactgaaccccagcaggatgtgctgttcaagcactggtatgcagacatcaagcaggac
ccagatcaggattctggcgtccatccaagctactacctatacatgtatgataaagtagtg
gcccccaacgtctcgctgcctgccaccttgacccacggctgtgactctgggaagctgcca
ggtagagctccagagggaaatgaagaggtccttggtgccctgctgaagcaccattaccac
gaggagcagaagagggcttcatcctgctctgaaggatcttttgatgaagaggaagaatct
cagagagtggcaaaatcagttggtgccatagatcaccacactagaagttgttctgcagat
caagtgaaatccaaacatcccaatgtctgtgagcgtggccccttggctgttgtcatggaa
acccacccgagtgagcacgccttcttgcctttcattaaggacgtcagctcggaggatgac
aaggacaaaatcgtgatggagattctgcaaatgtacactaaacagcaggagaggctcaac
gcaactctggaaaagaaaatgcagttgcaaatggagctggatctgttacgcagccccagc
aggtctacccggctgaaggagctgtcggagcagtgcgagctgcagcaggagctggagttg
gtgcagagcgagcaggctagcaggctggaggagctcagagaggagcagatggagctggag
aagaggttggagcagctgagacagcagggctgtgcatgtgaccgctcctctgagagagac
cgggaggcacagtatgcagcacagctgtcggagctgcgccagaggctggatcaggctgag
gctgaccgccaggagctgcaggaagatctgcagagggagcgggaggcccgggagaaactg
gagaagatgattactgagatgaagctgcagatcgctgagaaaaataaccaggaggcgaag
gtaaactccaagaacaaataa
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