Polyodon spathula (Mississippi paddlefish): 121322554
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Entry
121322554 CDS
T07273
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121322554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121322554
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Serotonin (5-HT3)
121322554
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
121322554
NCBI-ProteinID:
XP_041118602
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Position
11:28543385..28549963
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AA seq
472 aa
AA seq
DB search
MSWVSIVHYLTLVVFIAALLFQAGYTADSKNNLPESIYMRFYKTFQPILDTPGMRPSSTW
RQPTHINLSINIKEIIGVDEKTHILITFVALRQLWFNEFLVWDPSEFDGMDHLNVPVEFI
WTPDFYIYEFVGEDLSPFIPYLYLHHDGQVIHDQPIRAVTSCNLDIFYFPFDTHSCILTF
GPYLHTVRDIRLGLHLPSEQLLKESLQSLGNRGEWELLNITGSPLPFYYQNEEWPMCVFT
VKIRRRPIMYLVKLVIPSAFLVLLDILSFFLPVHSVDRCAFKVTLLLGYSMFLLMMNNIL
PNNSGGTPLIGGYFLVCMALLVASLLESIFISNVLHRKSLQGREVPSWVRTLVLHKLAQM
ICYKKKESSKHQAEESIYTIHSNKNAENPVWKISSQKPACTEIRILTFLKKTCEDVQVMR
DTLKNLQARKKSSKEWVEVSCVLDILLLRLYILFIALTSLCLCILWSHWYRV
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagctgggttagcatcgtacactacctgaccctcgtggtctttattgcagcgctactg
tttcaagcgggatacacggctgattctaagaataatcttccagaaagcatctacatgcga
ttttataaaacgttccagccgattctggatacccccggcatgaggccgagcagcacctgg
agacagccaacacacatcaacctctcaataaacatcaaggaaatcattggagtggatgag
aagacacacatcctcattacttttgttgcattgagacagctgtggtttaatgagtttctg
gtgtgggatcccagtgagtttgatggaatggatcacctcaacgtgcctgtggaattcatt
tggactccagatttctatatttatgaattcgtcggggaagacctgtcaccatttatcccc
tatctgtacctgcaccatgatgggcaagtgatacacgaccagcccataagagccgtcacc
tcctgcaacctggacatcttttacttccccttcgacacccacagctgcatccttacattt
ggaccctacctccatacagtgcgtgatatcaggcttggcctccatttgccctctgaacag
ttattaaaagaatctctccaaagccttggaaaccgaggggaatgggagctgctaaatatc
acaggaagcccattgccattttactaccaaaacgaggagtggccaatgtgtgtcttcact
gtaaagatcaggcggaggcctatcatgtatttggtaaagctggtcattcccagtgctttt
ctggtgctgcttgacattttgagtttcttcctcccagtccactctgtagacaggtgtgcc
ttcaaagtgactctgctgctgggatacagcatgttcctactaatgatgaacaacattctc
ccaaacaattcaggagggacccccctgataggtggctatttcttagtctgcatggccctc
cttgttgccagcctgctggagagcatctttatttccaacgttcttcaccggaagtccttg
cagggcagggaggttcctagctgggtcaggacactggttctgcacaagttggcccagatg
atatgctacaagaagaaggagtctagcaaacaccaggctgaggagagcatttacaccatt
catagcaataaaaatgcagaaaacccagtttggaagatcagtagccagaaacctgcctgc
acggaaataaggattttgacatttctaaagaagacttgtgaggacgtccaggtgatgagg
gacactctgaaaaatcttcaggccaggaagaaaagcagcaaggaatgggtggaagtgtcc
tgtgtcctggacatcctgctcctccgtttgtacatcctgtttatcgccttgaccagcctc
tgtctgtgtatcctctggagtcactggtacagggtatga
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