Polyodon spathula (Mississippi paddlefish): 121322628
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Entry
121322628 CDS
T07273
Name
(RefSeq) arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121322628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121322628
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121322628
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121322628
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
121322628
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121322628
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
PH
Ank
Ank_3
Ank_5
Ank_4
PH_21
PH_8
PH_11
Motif
Other DBs
NCBI-GeneID:
121322628
NCBI-ProteinID:
XP_041118732
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All DBs
Position
11:29655574..29697597
Genome browser
AA seq
850 aa
AA seq
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MKVTVAFEECLKDSPRFRAVIEEVEGDVSELESKLDKLVKLCIGMIDAGKAYNTANKQFV
NGVRELAQQSAKDKVIETSLTKFAESLQGMINYHTILFDHAQRSIKSQLMTFVKEDLRKF
KDAKKQFDKVSEEKETALVKNAQVARNKQHEVEEATNILTATRKCFRHIALDYVLQINVL
QSKRRSEILKSMLSFMYAHLTFFHQGYDLFTELQPLMKQLGGQLDQLVVDAAKEKRDMEQ
KHSTIQQKAALQVTASDTVPDARCFCAWRSTGDFSNDDTKLEYNVDADNGIAMEGYLFKR
ASNAFKTWNRRWFSIQNNQLVYQKKFKDNPTVVVEDLRLCTVKHCEDIERRFCFEVVSPT
KSCMLQADSEKLRQAWIKAVQNSIATAFREQGQSSEKLDRKCSMSTGSLDSGGELKEKSL
KGESALQRVECIAGNASCCDCGMAEPRWASINLGITLCIECSGIHRSLGVHLSKVRSLTL
DSWEPELLKVMCELGNSVINRIYEANLEALGAKKPQPGDPRQEIEAYIRAKYVEKRFVQK
PTAAEQRTKVISLSRQEKRLSSSSSEYLPPRPPPPTPKMRPASHISAAVACSDEARRESL
FCPDELDSLFSYFDTSSKLRSKKSVDSGIQNSAAGSKEMLASTPSANSLSEPGVPEPAVP
EPGKNSAGLVEFKECSPGLQLYWAAFARNLPDMAEALAQGAEVNWVNTEADKQTPLIQAV
LGGSLVACEFLLQNGANVNNHDVRGRGPLHHATILGHTGQVCLFLKRGASQNAVDRDDKT
PLAIAVDAANADIVTLLRLAKMNDEMRESEGLYGQPGDETYQDIFRDFSHMASNDPEKLN
RFQQYDSQRL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttactgtggcttttgaggaatgtctcaaagattctcccagattcagggcagta
atcgaggaggtagagggagatgtatccgaactggaatccaagcttgataagctggtaaag
ctttgtattggaatgatcgatgctggcaaggcgtacaatacagccaacaaacagtttgtg
aatggagtccgagaacttgcccagcagtctgccaaagacaaggtcattgagaccagcttg
acgaaatttgcagaaagcctgcaggggatgatcaattatcacacaatcctgtttgaccat
gctcagagatccatcaagtcacagcttatgacgtttgtgaaagaagatctgcgcaagttc
aaagatgccaagaagcagtttgacaaggtcagcgaggaaaaggagacggcgctggtgaag
aatgcacaggtggctcgcaacaagcaacatgaggtggaggaggccactaacatcctgact
gcaacccggaagtgtttcagacacatcgctctggactatgtgctgcagattaacgtccta
cagtccaaaaggagatctgaaattttaaaatcgatgctctccttcatgtacgcccacctc
acttttttccatcagggctatgacttgttcacagagctgcagccgcttatgaaacagctg
ggagggcagttggaccagctggtggtagatgcagcaaaggagaagcgggatatggaacag
aagcactccaccatccagcaaaaggctgctctgcaggtgactgcgtctgatacagtgcca
gatgccagatgcttttgtgcttggaggtcaacaggtgacttctcgaatgacgacaccaag
ctggaatacaatgtggacgccgacaatggaattgccatggaggggtatcttttcaaaagg
gccagcaatgccttcaaaacatggaacaggcgctggttctctattcaaaacaaccagcta
gtataccagaagaagtttaaggataaccctactgtggtggtggaagacctgaggctgtgc
acagtgaaacactgtgaggacattgagcgccgcttctgcttcgaggtcgtctctcctaca
aagagctgcatgttgcaggcagactctgaaaagctgcggcaggcgtggattaaggctgta
caaaacagcatcgctacagcgttcagggagcagggtcaaagctctgagaagctggacagg
aagtgttccatgtctacaggcagccttgattctggtggcgagctgaaggagaagtctctg
aaaggggagagcgcgctgcagcgggttgagtgcatcgctggcaatgccagctgctgtgac
tgtgggatggctgaacctcgctgggccagcatcaatttggggatcacactatgcatcgag
tgctcaggaatacaccggagtcttggggtccacttgtccaaagtccggtctcttacctta
gactcttgggagcctgaactgctaaaggtcatgtgcgagttggggaacagtgttataaac
cggatatatgaggctaatttggaagcgctgggtgccaagaaaccacagcctggagatccc
aggcaagagattgaagcttacatcagagcaaagtatgttgagaaaaggtttgtccagaaa
ccaacggcagcagagcagagaacaaaggttatatctctgagcaggcaggagaaacggctg
agcagtagcagctctgagtacctgccacctcgccctcctccacccactcccaaaatgaga
ccagcgtcccacatctcagcggctgtggcttgtagcgacgaggcccgtcgggagtctctc
ttctgtcccgatgagctagactcgctcttctcctactttgacacctcttccaagctgcgt
agtaaaaagagtgtggacagcgggatccagaacagtgctgctggaagcaaggagatgctg
gcctctaccccgtctgcaaacagcctgagtgaacccggggttccagagcctgccgttcca
gagcctgggaagaactctgcagggctggtggagtttaaggaatgctctccaggactccag
ctatactgggctgcattcgcacgcaacctcccagacatggcagaggcgctggctcagggc
gcggaggtgaactgggtgaacacagaggccgacaagcaaacccccttaatacaggccgtc
ctggggggttcgctggttgcctgtgagtttttgctgcagaacggtgctaatgtgaataat
catgacgtccgggggagaggacctctgcatcatgccaccatccttggacacactgggcag
gtgtgtctgttcttgaaaagaggtgccagtcagaatgcagtcgaccgtgacgacaaaacc
cctcttgcaatagctgtggatgctgccaatgcagacattgtaaccttgttacggctggcg
aagatgaatgatgaaatgcgggaatcggaggggctctatggacagccaggggatgaaact
tatcaagatattttccgagatttctctcatatggcttcaaatgatccagagaaactgaac
cggttccagcagtatgactcccaaaggctgtga
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