Polyodon spathula (Mississippi paddlefish): 121322717
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Entry
121322717 CDS
T07273
Name
(RefSeq) uncharacterized protein LOC121322717 isoform X1
KO
K26434
leucine-rich repeat flightless-interacting protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121322717
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Other transcription factors
LRRFIP
121322717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRRFIP
Motif
Other DBs
NCBI-GeneID:
121322717
NCBI-ProteinID:
XP_041118865
LinkDB
All DBs
Position
11:3672274..3736134
Genome browser
AA seq
1918 aa
AA seq
DB search
MGTQGSGRKRIPNRERLTAEDDALNLIAREAESRLAAKRAARAEAREIRMKELERQQKEI
YQVQKKYYGLDNKWGDIEQWMEDSERYSRRARRNTSMSDDDERMSVGSRGSLRSDFDSTA
VYGGAGSPKDKPKKKSSKATNGFDEGYHGSTQSRKSSRSSRHSDESRRSQSSRQEHLLGN
HYSSDLYSNSGLSSSSRAQSSAQNGTRPSMLCSDALLPRSLRGSLYEESVHSGTRRFSAS
SSRAPSEYSGFPGSSSRASSRASSARASPVLLEDSSSIAGFLRSSAHSSSSSVRSDLDDV
TIPDFPDVEERPERDFAEKGSRSASTLSAATLASLGGSSSRRGSGDTSISADTEASIREI
KDIHELKDQIQDVESRYMQGLKEMKDSLAEVEEKYRKAMVSNAQLDNEKSNFMFQVDTMK
DSLMELEEQLAETRRELDEKVKEHERERHAHSVLKFQFNEMKENLRQSEELLAEIRQLKL
KQESSVREVSDLQETIEWKDKKIGALERQKEYFDVIRTERDELRDEIVLLKDVIKKHGIV
LGAELTSNGEVGDAVLDSTVHTDSVKRSASDSTPVLQTPRDGLIGKATAVEMKISLLADV
GNKEILQSAGDKAEKQESWDDDAETQEGHVGEKAQENLAENEQSASMPDDDTLNDPGDVQ
QREQSDISSQTVEPDSTLGSNTLAWSSVDDGDDINENDIDEHSPVLELTYSVDDGSLEAD
SLIAEGEIMRERETEAINRGGEGGKEVVQVITGPDDEVEDETEQALSDKEAETTEKGNSD
GQQSVQSAEEMRIEGGETKTQEESLDSNKEECATGSAVTEKVSDEENELAQDPIEKAVEA
NCIGEERVQKADDTHIEGKEIQEEGNVKQVIEEAEIKGLVKDDVFGDKNAQKAEHKIAQS
PPEKSDENNCTGEEGVQTAEDTNIEGKETQEGSRTNLEGSTATEGEVKQAAETVEVKGLV
KGEVLGERDAIYEQGAIDELVKEKEPGASTANEEKAEHEIAPGPTEKVVEANCTGEERVQ
TAEDTNIEGNETQKETIDRTNVKQVTEKVEAEGLAVDKVLDEEKVIPEQGEIDKLMENKE
PGASTGSEEKVEHEIAQGPTEKVEEKVNHAGEDIVRSAEAIHTKGAQDENIDSTDIMEMT
VTEGDVRQVTEKVGDESLVQLEKTGITGECQEELDSDVVKSKDASSCEAQTEHEEQEGVT
METKAEQIEEHEHESGEIEDSEKALQSIAIDEPETSCNDSTVMEEVTVGSNVQAGNEKKE
LVSLEPETKQEEEVLPRDTMTPTVVHHEPDSEDKGVSEEALQHRSEDEPEVSCESGTTNN
NVERVTDENDSKENYGDMTASCVVQEDDQGEVSIPLEDKGGDIEEVKNEIGNSSQKDEGE
GLKQDDLKKEDSEKKVQSQKTTEDQNEEDKLENETNLESHTAAEQSVEGIANVETVQENI
MDRVIDQGTGDDVKEEPLFGGEGQKVISEDYIEMIEEETRTVNKELKGTESRNVGLAVVK
DVVGSKRETVAQFEICVEKVGAELDHQDNLDEKIHPKNLETVGTVTEDSKPSENSELLPA
DKVASQSTVQVETLKDEKINQGLEPAVTVADNIKSECMFPNGSEQEKTDVSKETAETVIQ
QTTADLSGCAISEEMDIAEKKVDAFHLEKERESKDQQPQHEHQDEAQEVKQEEAVEEKSV
EKVENIPDDIQEQEQVPAKEEKQDETQLTQKEVQEEKGETEKEEEKDNEEDEEGESFDFD
DEVGQDLEESDQKVCLEDPLKQKQTQQQGAETNDSSPVTKTGSQDKEQRSEKGDADQLKT
NDSESEKTGGEQNQKELEEVCSSGSQESVKESGERGQQGEDGTEQGNIGRGLEKELGESI
KRRSMFEDSVGESVGQKPDSAQGKEDSNSGSTEDLGKQDAAKGSKKGKGKNKDECQIS
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atgggaacccagggttctggacggaaaaggattccgaacagagagagattgacggccgag
gacgatgccttaaatctaattgcaagagaggcggagtcccgtttggctgcgaagcgagct
gcacgggcggaggcacgggagatcagaatgaaggagctggagagacagcagaaagagatc
tatcaggttcagaagaaatattacggtctggacaacaaatggggcgatatcgagcagtgg
atggaagacagtgagaggtactcccgccgagcacggagaaacacctcgatgtccgatgat
gatgagcgaatgtccgtgggcagccgtggcagcctgaggtcagacttcgacagcactgct
gtctatggaggggctggctcacccaaggacaagcccaagaagaagagttctaaagccacc
aatggttttgatgaagggtaccatggatctactcagagtagaaagtctagtaggagctca
aggcacagcgatgagagtaggagatcacagtcatccagacaggagcacctgctggggaat
cactactcctcggacctgtacagtaacagcggcctctcctcctcctccagggcccagtct
tcagctcaaaatggaacgcggccttccatgctttgtagtgacgcccttctgcctcggagc
ctcaggggctccctgtacgaggagagtgtgcacagcgggacgcgccgctttagtgcctct
agctctcgagctccctcggaatacagtggtttcccgggctccagctcccgtgcttcctcc
cgggcaagctcggcccgtgccagccctgtgctgctggaggactccagctccatagcagga
ttcctgcgcagctcggctcacagcagcagcagcagtgtgcggagtgacctggatgacgtc
accattcctgacttcccagacgttgaagaaagaccggagagggactttgctgaaaaggga
tcccgcagcgcttccaccctgtcagctgctactcttgcctctttgggcgggtcttcctcc
cggagaggaagtggagacacctcgatctcagccgatacagaagcctcaatccgagagatt
aaggatattcatgagctaaaggaccagattcaggatgtggagagcagatacatgcagggg
ctcaaagaaatgaaggactccctggccgaggtcgaggagaagtacaggaaggccatggtg
tccaacgcccagctggacaacgagaagtccaacttcatgttccaggtggacaccatgaag
gactctctgatggagctggaggagcagctggccgagacgaggagagagttagacgagaag
gtcaaggaacatgaaagagaacgacacgcccactctgtgttgaaattccagtttaacgag
atgaaagaaaaccttagacaaagtgaagaattgttagctgaaattcggcagctgaaactg
aagcaggagagctctgttagagaggtttcagacttgcaggaaaccatcgaatggaaggat
aaaaagataggggcgttagagaggcagaaggaatattttgatgtaatccggactgagcgt
gatgagctcagagatgagattgtcctgctcaaggatgtaataaagaaacatgggatagtt
ctaggcgcagagctgacaagcaatggagaagtgggcgacgcagttcttgacagcacagtc
cacactgactctgtgaaacgatcagcgtcagactccactccggttctgcagactcctagg
gatgggctgattggcaaagccacggcggtggagatgaaaatttcgcttttggcggatgtt
ggaaataaagagatcttgcagagtgccggggacaaggctgaaaagcaggagagctgggat
gacgatgctgagacacaggaagggcatgtcggtgaaaaagcacaagagaatttggctgaa
aatgaacagtcagcatcaatgcctgatgacgacacactaaatgacccaggggatgttcag
caacgggagcagagtgacatttccagtcagaccgtagagcctgacagtaccttaggcagt
aatacacttgcttggagctcagttgatgatggagatgacataaatgaaaatgacattgac
gagcacagtccagttcttgagctgacatacagtgtagacgatggaagtttagaggccgac
agtctgatagcagaaggagagatcatgagagagagggaaacggaagcgattaacaggggg
ggtgaaggaggcaaggaagtggtgcaggtaataacaggacccgatgatgaggtggaagat
gagactgagcaagccctttccgataaagaagctgaaactactgaaaagggtaatagtgat
ggtcaacaaagtgttcagagtgcagaggagatgagaatagagggtggtgagactaaaacc
caagaagaaagcttagacagtaacaaggaagagtgtgcaacagggagtgctgtcactgaa
aaagtttcagatgaagagaatgaacttgctcaggatcctatagaaaaggctgttgaggct
aattgtattggtgaggaaagagttcagaaagccgacgatacccatattgaaggcaaagaa
atacaagaggagggtaatgtaaagcaagtaatagaagaagcagaaatcaaaggcttggta
aaagatgatgtttttggtgacaagaatgcgcaaaaggctgaacataaaattgctcagagt
cctccagaaaaaagtgatgagaataattgtactggtgaggaaggagttcagactgccgag
gataccaatatagaaggcaaagaaacacaagagggaagcagaacaaatcttgagggaagt
acagcaacagagggtgaagtaaaacaagcagcagaaacagtagaggttaaagggttggta
aaaggtgaagttttgggtgagagggatgcgatttatgagcagggagcaatagatgaattg
gtgaaggaaaaggagccaggtgcaagtacagcaaatgaggaaaaggctgaacatgaaatt
gctcctggacctacagaaaaagttgttgaggctaattgtactggtgaggaaagagtgcag
actgccgaggataccaatatcgaaggcaatgaaacacaaaaggaaaccatagaccgcaca
aatgtgaaacaagtaacagaaaaagtagaggctgaaggtttggcagtggacaaagttttg
gatgaagagaaggtgattcctgagcaaggagaaatagataaattaatggagaacaaggag
ccaggggcaagtacaggatctgaggaaaaggttgaacatgaaattgctcagggtcctaca
gaaaaagttgaagaaaaagtaaatcatgctggtgaggatatagttaggagtgctgaggct
atccatacaaaaggagcacaagatgaaaacatagacagcacagatattatggaaatgaca
gtgacagaaggtgatgtaagacaggtaacagaaaaagtaggggatgaaagtttggttcag
ttagaaaagacaggcattacaggtgagtgccaagaggagttggatagtgatgtagtgaag
agcaaagatgcgagttcatgtgaggctcagacggagcacgaggaacaggaaggggttacc
atggaaactaaagcagagcaaatagaagaacatgagcatgaatccggggagattgaggat
agtgaaaaggccctacaaagtattgcaattgatgaaccagagacttcatgcaatgacagc
acagtcatggaggaggtgactgtgggatcaaatgtccaggctggcaatgagaaaaaagaa
ttagtttctttagagcctgaaacaaagcaggaagaagaggtcctaccaagagatacaatg
accccaaccgttgtccatcatgagccggattcagaggacaaaggtgtaagtgaggaagcc
ttacaacacagatctgaggatgaaccagaagttagttgtgaaagtggcacaaccaacaac
aatgtagaaagagtgactgatgagaatgacagtaaagaaaactatggagatatgacagct
tcatgtgttgtacaagaagatgaccaaggagaagtctcaatacctctggaagataagggt
ggagatattgaggaagtcaagaatgagataggcaacagcagccaaaaagatgaaggagaa
ggacttaaacaagacgacttgaagaaggaagattctgaaaagaaagtgcagagtcagaaa
acaactgaagaccaaaacgaagaagataaacttgaaaatgaaaccaatttagaaagtcac
actgcagcagagcagagtgttgaaggaatagcaaatgttgaaactgtacaggaaaatatc
atggatagggtcatagatcaagggactggagatgatgtaaaagaggaacctttgtttggt
ggagagggtcaaaaagtaatttcagaagactacattgagatgattgaagaagaaacgaga
actgtaaacaaggaattgaagggaacagagagtcgaaacgtagggctagcggttgttaaa
gatgttgttgggtctaagagagaaacagtagctcagtttgaaatctgtgtggagaaagta
ggtgctgaacttgaccaccaagacaatttagatgaaaaaatacaccctaagaaccttgaa
acagttggcactgtcacagaagatagtaaacccagtgaaaactctgaactgttaccagca
gacaaagtggcttcacaaagtaccgtacaagtagagacccttaaagatgagaaaatcaat
caaggtcttgagccagcagtcacagtggcagataatatcaaatcagaatgcatgttccct
aatggcagtgagcaggagaaaactgatgttagcaaagagacagctgaaacagtcattcag
caaactacagctgatttaagcggatgtgctatatcggaggaaatggatattgctgagaag
aaagtcgatgcatttcatttggagaaagaaagagagagtaaagaccagcagcctcaacat
gaacaccaagacgaggcccaggaagtgaagcaagaggaagcggtagaagaaaagagtgtg
gaaaaagtagagaacattcctgacgacatccaagaacaagagcaagtacctgctaaagag
gaaaagcaggatgagacacagctcacacaaaaggaagttcaagaggagaaaggtgagaca
gagaaggaggaagaaaaggacaatgaggaagatgaggaaggagagtcattcgactttgat
gatgaagtgggacaggatttggaagagtcggatcagaaagtttgcctagaagatccactt
aagcagaaacagacacagcaacagggtgctgaaacaaacgatagtagtcctgtgaccaag
actggtagtcaagataaagaacaaagaagtgagaagggagatgcagatcagcttaaaact
aacgattcagaaagtgaaaagacagggggagagcaaaaccaaaaggaattggaggaggtt
tgttcttctggtagtcaggaaagtgtgaaggagtcgggagagagagggcagcagggtgag
gacgggacagagcaaggaaacatagggagggggctcgagaaggagctgggagagagtata
aaaaggcgaagtatgtttgaagacagtgtaggggaatccgtggggcagaagccagacagc
gcacagggtaaggaggatagcaattcaggaagtactgaggatcttggaaagcaagatgca
gccaaggggagtaagaaaggaaaggggaaaaataaggatgagtgtcagatatcatga
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